RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 A0A1W2PQ09 198 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 MEIOCA2RUB1 952 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 ACOD1A6NK06 481 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 MITFO75030 526 aaPredicted RBP11.74□□□□□ -0.53
VMP1-206ENST00000587945 IGLV3-1P01715 115 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 SAA4P35542 130 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 RPL15P61313 204 aaKnown RBP11.74□□□□□ -0.53
VMP1-206ENST00000587945 GUCA2AQ02747 115 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 ROM1Q03395 351 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 RIPPLY1Q0D2K3 151 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 PTGES3Q15185 160 aaKnown RBP11.74□□□□□ -0.53
VMP1-206ENST00000587945 LCN1P1Q5VSP4 162 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 PLCXD3Q63HM9 321 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 FAHD1Q6P587 224 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 DEGS2Q6QHC5 323 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 GDPGP1Q6ZNW5 385 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 KRT74Q7RTS7 529 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 THAP5Q7Z6K1 395 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 ZNF679Q8IYX0 411 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 TMEM185AQ8NFB2 350 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 OR5A2Q8NGI9 324 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 NPRL2Q8WTW4 380 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 AQP3Q92482 292 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 UTP4Q969X6 686 aaKnown RBP11.74□□□□□ -0.53
VMP1-206ENST00000587945 DMRTB1Q96MA1 342 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 ZNF488Q96MN9 340 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 APOL4Q9BPW4 351 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 ZNF222Q9UK12 451 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 GTF2A1LQ9UNN4 478 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 PIGLQ9Y2B2 252 aa11.74□□□□□ -0.53
VMP1-206ENST00000587945 CAB39Q9Y376 341 aaPredicted RBP11.74□□□□□ -0.53
VMP1-206ENST00000587945 GSC2O15499 205 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 DNAJC8O75937 253 aaPredicted RBP11.73□□□□□ -0.53
VMP1-206ENST00000587945 EPHA2P29317 976 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 RIDAP52758 137 aaKnown RBP11.73□□□□□ -0.53
VMP1-206ENST00000587945 CAV3P56539 151 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 PROK1P58294 105 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 PLEKHG7Q6ZR37 379 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 FAM185AQ8N0U4 392 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 BATF2Q8N1L9 274 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 ZSCAN4Q8NAM6 433 aaPredicted RBP11.73□□□□□ -0.53
VMP1-206ENST00000587945 ZNF671Q8TAW3 534 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 C17orf50Q8WW18 174 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 ASB17Q8WXJ9 295 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 LRTOMTQ8WZ04 291 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 NRBF2Q96F24 287 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 CNN2Q99439 309 aaKnown RBP11.73□□□□□ -0.53
VMP1-206ENST00000587945 METTL8Q9H825 291 aaKnown RBP11.73□□□□□ -0.53
VMP1-206ENST00000587945 NUFIP1Q9UHK0 495 aaKnown RBP11.73□□□□□ -0.53
VMP1-206ENST00000587945 VPREB3Q9UKI3 123 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 TMEM14AQ9Y6G1 99 aa11.73□□□□□ -0.53
VMP1-206ENST00000587945 BTBD17A6NE02 478 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 A6NIN4 97 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 OR5B21A6NL26 309 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 RFPL4AA6NLU0 287 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 RFPL4AL1F8VTS6 287 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 M0R1W7 72 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 SYNGR1O43759 233 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 ZNF254O75437 659 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 SRSF10O75494 262 aaKnown RBP11.72□□□□□ -0.53
VMP1-206ENST00000587945 CLPXO76031 633 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 PAHP00439 452 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 NRASP01111 189 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 TTRP02766 147 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 ATP6V1B1P15313 513 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 PAX6P26367 422 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 CEBPDP49716 269 aaPredicted RBP11.72□□□□□ -0.53
VMP1-206ENST00000587945 UBE2E1P51965 193 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 CAPZA1P52907 286 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 ZNF829Q3KNS6 432 aaPredicted RBP11.72□□□□□ -0.53
VMP1-206ENST00000587945 MIDNQ504T8 468 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 DHRS7BQ6IAN0 325 aaPredicted RBP11.72□□□□□ -0.53
VMP1-206ENST00000587945 ASPHD2Q6ICH7 369 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 HCP5Q6MZN7 132 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 ZNF322Q6U7Q0 402 aaPredicted RBP11.72□□□□□ -0.53
VMP1-206ENST00000587945 C1orf122Q6ZSJ8 110 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 MEPCEQ7L2J0 689 aaKnown RBP11.72□□□□□ -0.53
VMP1-206ENST00000587945 SLC35F2Q8IXU6 374 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 CD177Q8N6Q3 437 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 TCEANCQ8N8B7 351 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 OR5K1Q8NHB7 308 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 BCAS4Q8TDM0 211 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 DNAJC9Q8WXX5 260 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 GPR173Q9NS66 373 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 C19orf12Q9NSK7 152 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 ENPP5Q9UJA9 477 aa11.72□□□□□ -0.53
VMP1-206ENST00000587945 LOC110117498-PIK3R3F6TDL0 507 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 H0YAE9 185 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 ANGPTL7O43827 346 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 MTRF1O75570 445 aaKnown RBP11.71□□□□□ -0.53
VMP1-206ENST00000587945 DHRS3O75911 302 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 CXCR4P61073 352 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 ESRRGP62508 458 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 BLMHQ13867 455 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 PDLIM3Q53GG5 364 aaPredicted RBP11.71□□□□□ -0.53
VMP1-206ENST00000587945 ZNF684Q5T5D7 378 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 AADACL4Q5VUY2 407 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 NCR3LG1Q68D85 454 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 ACP7Q6ZNF0 438 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 POC1AQ8NBT0 407 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms