RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	LIPK	Q5VXJ0	399 aa		10.37	□□□□□ -0.75
PKN1-208	ENST00000586900	UNQ9370/PRO34162	Q6UXP9	181 aa		10.37	□□□□□ -0.75
PKN1-208	ENST00000586900	LRRC28	Q86X40	367 aa	Predicted RBP	10.37	□□□□□ -0.75
PKN1-208	ENST00000586900	ZNF671	Q8TAW3	534 aa		10.37	□□□□□ -0.75
PKN1-208	ENST00000586900	BORCS8	Q96FH0	119 aa		10.37	□□□□□ -0.75
PKN1-208	ENST00000586900	COX4I2	Q96KJ9	171 aa		10.37	□□□□□ -0.75
PKN1-208	ENST00000586900	NR1H4	Q96RI1	486 aa	Predicted RBP	10.37	□□□□□ -0.75
PKN1-208	ENST00000586900	ZNF696	Q9H7X3	374 aa		10.37	□□□□□ -0.75
PKN1-208	ENST00000586900	DCAF16	Q9NXF7	216 aa		10.37	□□□□□ -0.75
PKN1-208	ENST00000586900	PPIAL4E	A0A075B759	164 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900		A0A087WXM4	84 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	TRBV5-7	A0A0A0MS05	114 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	SRRM5	B3KS81	715 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	PPIAL4D	F5H284	164 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900		H7C1Q1	480 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	SULT1B1	O43704	296 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	SC5D	O75845	299 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	CYB5R3	P00387	301 aa	Predicted RBP	10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	PPIAL4F	P0DN26	164 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	RAB3A	P20336	220 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	CPT2	P23786	658 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	AZGP1	P25311	298 aa	Known RBP	10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	MDH2	P40926	338 aa	Known RBP	10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	HAAO	P46952	286 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	RBP2	P50120	134 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	BTG1	P62324	171 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	TMEM155	Q4W5P6	130 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	ARMCX4	Q5H9R4	360 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	DMRTC1	Q5HYR2	192 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	ZNF826P	Q6ZT77	177 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	LHFPL2	Q6ZUX7	228 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	PHC2	Q8IXK0	858 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	MUC20	Q8N307	709 aa	Predicted RBP	10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	GCSAM	Q8N6F7	178 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	OR13C5	Q8NGS8	318 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	OR13C9	Q8NGT0	318 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	AQP3	Q92482	292 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	PHYHIP	Q92561	330 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	RPL3L	Q92901	407 aa	Known RBP	10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	C18orf12	Q96KH6	178 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	PKIB	Q9C010	78 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	PPIAL4A	Q9Y536	164 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	CR1	P17927	2039 aa		10.36	□□□□□ -0.75
PKN1-208	ENST00000586900	YLPM1	P49750	1951 aa	Known RBP	10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	ACAN	P16112	2415 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	IGKV1-27	A0A075B6S5	117 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	IGHV4-61	A0A0C4DH41	118 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	FAM230A	A0A1W2PPH8	454 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	hCG_1807616	A0A1W2PRN6	198 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	TRIM64C	A6NLI5	447 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900		J3QT63	122 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	LGALS8	O00214	317 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	NOS1AP	O75052	506 aa	Predicted RBP	10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	ALDOB	P05062	364 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	OCM	P0CE72	109 aa	Predicted RBP	10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	CD99	P14209	185 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	IGFBP3	P17936	291 aa	Predicted RBP	10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	FST	P19883	344 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	GABRA5	P31644	462 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	IL24	Q13007	206 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	ZMYND11	Q15326	602 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	KCNJ8	Q15842	424 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	ACSM3	Q53FZ2	586 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	AVPI1	Q5T686	147 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	SYT6	Q5T7P8	510 aa	Predicted RBP	10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	TEX36	Q5VZQ5	186 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	ASPHD2	Q6ICH7	369 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	HAGHL	Q6PII5	290 aa	Predicted RBP	10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	SPIC	Q8N5J4	248 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	TSPAN14	Q8NG11	270 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	TRMT10A	Q8TBZ6	339 aa	Known RBP	10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	LRRC29	Q8WV35	223 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	CPNE2	Q96FN4	548 aa	Predicted RBP	10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	DERL3	Q96Q80	235 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	OR14A2	Q96R54	314 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	TMED9	Q9BVK6	235 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	TMEM165	Q9HC07	324 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	CKLF	Q9UBR5	152 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	FOXJ3	Q9UPW0	622 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	POLDIP2	Q9Y2S7	368 aa		10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	SF3B6	Q9Y3B4	125 aa	Known RBP	10.35	□□□□□ -0.75
PKN1-208	ENST00000586900	HIVEP1	P15822	2718 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	TRAV38-1	A0A0B4J264	116 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	MAGEB3	O15480	346 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	NDUFA2	O43678	99 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	HEXA	P06865	529 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	MUC1	P15941	1255 aa	Predicted RBP	10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	TGFBR2	P37173	567 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	MTCP1	P56278	107 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	LMO4	P61968	165 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	PPP3R1	P63098	170 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	ZNF404	Q494X3	552 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	CALHM1	Q8IU99	346 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	CIART	Q8N365	385 aa	Predicted RBP	10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	POC1A	Q8NBT0	407 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	CLDND2	Q8NHS1	167 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	NPRL2	Q8WTW4	380 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	C12orf43	Q96C57	262 aa	Known RBP	10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	C1orf159	Q96HA4	380 aa		10.34	□□□□□ -0.75
PKN1-208	ENST00000586900	METTL17	Q9H7H0	456 aa	Predicted RBP	10.34	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms