RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 PLA1AQ53H76 456 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 RSBN1Q5VWQ0 802 aaPredicted RBP8.97□□□□□ -0.97
LIG3-203ENST00000585370 RTL6Q6ICC9 239 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 VWA1Q6PCB0 445 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 ASCL4Q6XD76 172 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 CADM3Q8N126 398 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 ZSCAN4Q8NAM6 433 aaPredicted RBP8.97□□□□□ -0.97
LIG3-203ENST00000585370 PXT1Q8NFP0 134 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 OR10R2Q8NGX6 335 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 GPX8Q8TED1 209 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 MRPS24Q96EL2 167 aaKnown RBP8.97□□□□□ -0.97
LIG3-203ENST00000585370 BORCS8Q96FH0 119 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 NEDD4LQ96PU5 975 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 TMEM59Q9BXS4 323 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 CACNG6Q9BXT2 260 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 METTL9Q9H1A3 318 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 PIGMQ9H3S5 423 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 CDH20Q9HBT6 801 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 GPR173Q9NS66 373 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 ING4Q9UNL4 249 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 AMDHD2Q9Y303 409 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 NOP16Q9Y3C1 178 aaKnown RBP8.97□□□□□ -0.97
LIG3-203ENST00000585370 HIVEP1P15822 2718 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 SETD2Q9BYW2 2564 aaPredicted RBP8.96□□□□□ -0.97
LIG3-203ENST00000585370 ZNF503-AS2A6NEH8 195 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 RAB27BO00194 218 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 RAD51DO75771 328 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 KDM4BO94953 1096 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 DHFRP00374 187 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 SELEP16581 610 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 ZNF14P17017 642 aaPredicted RBP8.96□□□□□ -0.98
LIG3-203ENST00000585370 ANOS1P23352 680 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 HLA-DMAP28067 261 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 OPRM1P35372 400 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 PLA2G7Q13093 441 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 GK2Q14410 553 aaPredicted RBP8.96□□□□□ -0.98
LIG3-203ENST00000585370 PPA1Q15181 289 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 PNLIPRP3Q17RR3 467 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 C3orf36Q3SXR2 165 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 CDNFQ49AH0 187 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 AGAP6Q5VW22 663 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 OLFML2AQ68BL7 652 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 SEM1Q6ZVN7 128 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 MOB3CQ70IA8 216 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 SSX8Q7RTT4 187 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 CD163Q86VB7 1156 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 ZNF584Q8IVC4 421 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 ZNF808Q8N4W9 903 aaPredicted RBP8.96□□□□□ -0.98
LIG3-203ENST00000585370 FAM89BQ8N5H3 189 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 ZNF610Q8N9Z0 462 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 TMEM229BQ8NBD8 167 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 OR5A2Q8NGI9 324 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 TNFAIP8L1Q8WVP5 186 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 AQP3Q92482 292 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 PIGCQ92535 297 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 C1orf147Q96MC9 270 aaPredicted RBP8.96□□□□□ -0.98
LIG3-203ENST00000585370 HIST1H2AAQ96QV6 131 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 NOX3Q9HBY0 568 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 IL36GQ9NZH8 169 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 NLKQ9UBE8 527 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 SH3BGRL2Q9UJC5 107 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 ZNF835Q9Y2P0 537 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 STARD10Q9Y365 291 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 MPC1Q9Y5U8 109 aa8.96□□□□□ -0.98
LIG3-203ENST00000585370 MED12LQ86YW9 2145 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 MEIOCA2RUB1 952 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 ANKRD30BLA7E2S9 258 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 CD300LBA8K4G0 201 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 INMT-MINDY4F8WBC2 141 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 H3BUI4 141 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 MSTNO14793 375 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 AKR7A2O43488 359 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 CDC14BO60729 498 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 CA11O75493 328 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 CRTAPO75718 401 aaPredicted RBP8.95□□□□□ -0.98
LIG3-203ENST00000585370 LYZL6O75951 148 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 MPIG6BO95866 241 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 IGKV3-15P01624 115 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 TCRBP04435 133 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 AKAIN1P0CW23 69 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 TMEM225BP0DP42 221 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 CPT2P23786 658 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 RCVRNP35243 200 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 RAD52P43351 418 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 CBX5P45973 191 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 OR3A4PP47883 348 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 SRP9P49458 86 aaKnown RBP8.95□□□□□ -0.98
LIG3-203ENST00000585370 TAS2R19P59542 299 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 RPS27AP62979 156 aaKnown RBP8.95□□□□□ -0.98
LIG3-203ENST00000585370 ADORA2A-AS1P86434 159 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 FOXF2Q12947 444 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 UNC119Q13432 240 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 CDSNQ15517 529 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 C11orf91Q3C1V1 193 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 CEACAM21Q3KPI0 293 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 ZNF260Q3ZCT1 412 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 OR10K2Q6IF99 312 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 FBXW12Q6X9E4 464 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 BTN2A1Q7KYR7 527 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 BHLHA15Q7RTS1 189 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms