RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PTGER4P35408 488 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 S100A10P60903 97 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PHYHD1Q5SRE7 291 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PRAMEF20Q5VT98 475 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RTL6Q6ICC9 239 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 EIF5AL1Q6IS14 154 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SHDQ96IW2 340 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 S100A13Q99584 98 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 TMEM231Q9H6L2 316 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ACKR4Q9NPB9 350 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 MRPS17Q9Y2R5 130 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 IGKV1D-8A0A087WSZ0 117 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 HKR1P10072 659 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PNLIPP16233 465 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ECI1P42126 302 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CAV2P51636 162 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ZNF133P52736 654 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 HIST1H3AP68431 136 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 S100A12P80511 92 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 Q3ZCU0 254 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 HIST2H3PS2Q5TEC6 136 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RPL7L1Q6DKI1 246 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 FOXL2NBQ6ZUU3 175 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 HIST2H3AQ71DI3 136 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 TMEM54Q969K7 222 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 NABP1Q96AH0 204 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 HRH4Q9H3N8 390 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RHOFQ9HBH0 211 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 TAF9BQ9HBM6 251 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ZNF701Q9NV72 531 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 C1orf123Q9NWV4 160 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 MCTS1Q9ULC4 181 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PIGLQ9Y2B2 252 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 MYO7BQ6PIF6 2116 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 A0A1W2PQM1 296 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 OR5H15A6NDH6 313 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RRP8O43159 456 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 F12P00748 615 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SFTPBP07988 381 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PVALBP20472 110 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RBM39Q14498 530 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SEMA6DQ8NFY4 1073 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 C10orf35Q96D05 121 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 NRIP2Q9BQI9 281 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CNTNAP3Q9BZ76 1288 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SAV1Q9H4B6 383 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RCC2Q9P258 522 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 MLXQ9UH92 298 aa12.43□□□□□ -0.42
CDK5RAP3-237ENST00000585163 DHRS7CA6NNS2 312 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 TP53I11O14683 189 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 LRP3O75074 770 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ZNF708P17019 499 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RBMXP38159 391 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 NPBWR1P48145 328 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 GUSBP11Q6P575 273 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RAB11FIP2Q7L804 512 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 C6orf201Q7Z4U5 140 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 DECR2Q9NUI1 292 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 EML6Q6ZMW3 1958 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 IGHV5-10-1A0A0J9YXX1 117 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CD63P08962 238 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 MUC1P15941 1255 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SPEM2Q0P670 501 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 IAH1Q2TAA2 248 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 GALNTL5Q7Z4T8 443 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 LRRC18Q8N456 261 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PIGTQ969N2 578 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ZNF385AQ96PM9 386 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ZNF2Q9BSG1 426 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ELL3Q9HB65 397 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 FAM96BQ9Y3D0 163 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PCDHGA1Q9Y5H4 931 aa12.42□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RTTNQ86VV8 2226 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 A0A087WZY1 265 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ST8SIA5O15466 376 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SFTPCP11686 197 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 LPAR6P43657 344 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 MRPL14Q6P1L8 145 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 FOXRED2Q8IWF2 684 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SULF2Q8IWU5 870 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CCDC54Q8NEL0 328 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 Q96M66 194 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PIGQQ9BRB3 760 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 AKIRIN1Q9H9L7 192 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PLEKHJ1Q9NW61 149 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CFAP54Q96N23 3096 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 M0R135 149 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CST4P01036 141 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 APOC1P02654 83 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SERPINA5P05154 406 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CTSDP07339 412 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RCC1P18754 421 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 GABRR1P24046 479 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RPL12P30050 165 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SULT1A2P50226 295 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CCL7P80098 99 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 TMEM268Q5VZI3 342 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 OR2A2Q6IF42 318 aa12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RPUSD3Q6P087 351 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PPP1R3BQ86XI6 285 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms