RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 IGHV4-31P0DP07 118 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 IFI30P13284 250 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 IL9P15248 144 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF19P17023 458 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 HLA-GP17693 338 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 RAB3AP20336 220 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 CSRP1P21291 193 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 NUP62P37198 522 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 RBM34P42696 430 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 SSR2P43308 183 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 GPR4P46093 362 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 CCL23P55773 120 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 RGS8P57771 180 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 OR10A3P58181 314 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 OR12D2P58182 307 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 RAB8AP61006 207 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 SSTP61278 116 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 STXBP1P61764 594 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ACTA2P62736 377 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ACTG2P63267 376 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 MAT1AQ00266 395 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 SSBP1Q04837 148 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC3A1Q07837 685 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 LY6DQ14210 128 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 CDK5R1Q15078 307 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ZMYND11Q15326 602 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 OR1Q1Q15612 314 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF77Q15935 545 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ZSWIM7Q19AV6 140 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 MOGAT2Q3SYC2 334 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 PHLDA2Q53GA4 152 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 TMEM41BQ5BJD5 291 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC35D3Q5M8T2 416 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 CLEC12AQ5QGZ9 265 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF684Q5T5D7 378 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 TMUB2Q71RG4 321 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 RTN4RL2Q86UN3 420 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 VASH2Q86V25 355 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 TRAPPC5Q8IUR0 188 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 MISPQ8IVT2 679 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 STHQ8IWL8 128 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 CDH26Q8IXH8 852 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ABCA7Q8IZY2 2146 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 OR2L13Q8N349 312 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 FTMTQ8N4E7 242 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ACOT4Q8N9L9 421 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 LINC01555Q8NAE3 123 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 MFSD9Q8NBP5 474 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 C17orf47Q8NEP4 570 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 OR6C4Q8NGE1 309 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 OR52L1Q8NGH7 329 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 OR52H1Q8NGJ2 320 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 OR6M1Q8NGM8 313 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 OR10G8Q8NGN5 311 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 OR5M9Q8NGP3 310 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 OR6K3Q8NGY3 331 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 OR4C6Q8NH72 309 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 TMEM239Q8WW34 195 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 HAS2Q92819 552 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 BPIFA2Q96DR5 249 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 TM4SF19Q96DZ7 209 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 SMIM19Q96E16 107 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 NUS1Q96E22 293 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 S100A16Q96FQ6 103 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 FAM71F1Q96KD3 344 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 C4orf36Q96KX1 117 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 C10orf90Q96M02 699 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ZFP3Q96NJ6 502 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 STACQ99469 402 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF426Q9BUY5 554 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 HCAR1Q9BXC0 346 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 SIRPDQ9H106 197 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 C20orf85Q9H1P6 137 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 LINC00597Q9H2U6 94 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 METTL17Q9H7H0 456 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 IFT46Q9NQC8 304 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF701Q9NV72 531 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 TAS2R8Q9NYW2 309 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 OR6C2Q9NZP2 312 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 COPS7AQ9UBW8 275 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC23A2Q9UGH3 650 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 SCML1Q9UN30 329 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 FOXJ3Q9UPW0 622 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 WDR83OSQ9Y284 106 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF443Q9Y2A4 671 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ATG4BQ9Y4P1 393 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ETV7Q9Y603 341 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF780BQ9Y6R6 833 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 V9GY05 133 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 TRBV5-5A0A0J9YX44 114 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 A6NIN4 97 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 ACOD1A6NK06 481 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 FAM183AA6NL82 134 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 RIIAD1A6NNX1 92 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 ATP6V1G2-DDX39BF2Z307 99 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 H0YC42 278 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 H7C417 338 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 DNASE2O00115 360 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 IMPA2O14732 288 aa3.23□□□□□ -1.89
SMCHD1-208ENST00000583344 ARPC3O15145 178 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms