RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 CEBPDP49716 269 aaPredicted RBP13.04□□□□□ -0.32
SREBF1-221ENST00000583080 HMGA2P52926 109 aa13.04□□□□□ -0.32
SREBF1-221ENST00000583080 BLVRAP53004 296 aa13.04□□□□□ -0.32
SREBF1-221ENST00000583080 RPL31P62899 125 aaKnown RBP13.04□□□□□ -0.32
SREBF1-221ENST00000583080 ZNF273Q14593 569 aa13.04□□□□□ -0.32
SREBF1-221ENST00000583080 CEP78Q5JTW2 689 aa13.04□□□□□ -0.32
SREBF1-221ENST00000583080 Q6ZS46 218 aa13.04□□□□□ -0.32
SREBF1-221ENST00000583080 CD177Q8N6Q3 437 aa13.04□□□□□ -0.32
SREBF1-221ENST00000583080 OR2T33Q8NG76 320 aa13.04□□□□□ -0.32
SREBF1-221ENST00000583080 OR4M1Q8NGD0 313 aa13.04□□□□□ -0.32
SREBF1-221ENST00000583080 WNT10AQ9GZT5 417 aa13.04□□□□□ -0.32
SREBF1-221ENST00000583080 MYLK2Q9H1R3 596 aa13.04□□□□□ -0.32
SREBF1-221ENST00000583080 CCDC134Q9H6E4 229 aa13.04□□□□□ -0.32
SREBF1-221ENST00000583080 HEXA-AS1Q9H8Q6 139 aa13.04□□□□□ -0.32
SREBF1-221ENST00000583080 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.04□□□□□ -0.32
SREBF1-221ENST00000583080 BAIAP2Q9UQB8 552 aa13.04□□□□□ -0.32
SREBF1-221ENST00000583080 DNAH9Q9NYC9 4486 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 COL7A1Q02388 2944 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 A0A1W2PRX2 142 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 A6NDX4 124 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 RIIAD1A6NNX1 92 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 ZNF732B4DXR9 585 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 SELENOFO60613 162 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 MTRF1O75570 445 aaKnown RBP13.03□□□□□ -0.32
SREBF1-221ENST00000583080 KRT36O76013 467 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 CCNB2O95067 398 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 IFNGP01579 166 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 VSIG8P0DPA2 414 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 ZNF3P17036 446 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 LGALS4P56470 323 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 PSMA6P60900 246 aaKnown RBP13.03□□□□□ -0.32
SREBF1-221ENST00000583080 CNN3Q15417 329 aaKnown RBP13.03□□□□□ -0.32
SREBF1-221ENST00000583080 LDLRAD2Q5SZI1 272 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 TMEM200BQ69YZ2 307 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 IQCF1Q8N6M8 205 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 PAPD5Q8NDF8 572 aaKnown RBP13.03□□□□□ -0.32
SREBF1-221ENST00000583080 AQP3Q92482 292 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 CMTM5Q96DZ9 223 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 ZNF488Q96MN9 340 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 CMC2Q9NRP2 79 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 VNN3Q9NY84 501 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 KLHDC2Q9Y2U9 406 aa13.03□□□□□ -0.32
SREBF1-221ENST00000583080 FAM90A8PA6NJQ4 464 aa13.02□□□□□ -0.33
SREBF1-221ENST00000583080 RFPL4AA6NLU0 287 aa13.02□□□□□ -0.33
SREBF1-221ENST00000583080 RFPL4AL1F8VTS6 287 aa13.02□□□□□ -0.33
SREBF1-221ENST00000583080 JUNBP17275 347 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-221ENST00000583080 CD33P20138 364 aa13.02□□□□□ -0.33
SREBF1-221ENST00000583080 GNG3P63215 75 aa13.02□□□□□ -0.33
SREBF1-221ENST00000583080 SAMD4BQ5PRF9 694 aaKnown RBP13.02□□□□□ -0.33
SREBF1-221ENST00000583080 HAGHLQ6PII5 290 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-221ENST00000583080 ACP7Q6ZNF0 438 aa13.02□□□□□ -0.33
SREBF1-221ENST00000583080 SHFQ7M4L6 423 aa13.02□□□□□ -0.33
SREBF1-221ENST00000583080 OTULINQ96BN8 352 aa13.02□□□□□ -0.33
SREBF1-221ENST00000583080 USE1Q9NZ43 259 aa13.02□□□□□ -0.33
SREBF1-221ENST00000583080 GLCEO94923 617 aa13.01□□□□□ -0.33
SREBF1-221ENST00000583080 LYNP07948 512 aa13.01□□□□□ -0.33
SREBF1-221ENST00000583080 PIPP12273 146 aaPredicted RBP13.01□□□□□ -0.33
SREBF1-221ENST00000583080 DLX6P56179 175 aa13.01□□□□□ -0.33
SREBF1-221ENST00000583080 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.01□□□□□ -0.33
SREBF1-221ENST00000583080 BATF2Q8N1L9 274 aa13.01□□□□□ -0.33
SREBF1-221ENST00000583080 DTX3Q8N9I9 347 aa13.01□□□□□ -0.33
SREBF1-221ENST00000583080 OTOSQ8NHW6 89 aa13.01□□□□□ -0.33
SREBF1-221ENST00000583080 FAM81AQ8TBF8 368 aa13.01□□□□□ -0.33
SREBF1-221ENST00000583080 HIST1H2AAQ96QV6 131 aa13.01□□□□□ -0.33
SREBF1-221ENST00000583080 ARGLU1Q9NWB6 273 aaPredicted RBP13.01□□□□□ -0.33
SREBF1-221ENST00000583080 LRP12Q9Y561 859 aa13.01□□□□□ -0.33
SREBF1-221ENST00000583080 MEX3AA1L020 520 aaKnown RBP13□□□□□ -0.33
SREBF1-221ENST00000583080 ODF3BA8MYP8 253 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 SYNGR1O43759 233 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 PEX14O75381 377 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 ARG1P05089 322 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 ATP6V1B2P21281 511 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 PAICSP22234 425 aaKnown RBP13□□□□□ -0.33
SREBF1-221ENST00000583080 PRDX6P30041 224 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 BLCAPP62952 87 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 SMIM21Q3B7S5 101 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 CEACAM21Q3KPI0 293 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 POC1AQ8NBT0 407 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 WFDC9Q8NEX5 89 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 OR2T27Q8NH04 317 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 ZNF671Q8TAW3 534 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 RPS4Y2Q8TD47 263 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 THEM6Q8WUY1 208 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 DGCR6LQ9BY27 220 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 PRSS22Q9GZN4 317 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 OR51V1Q9H2C8 321 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 NIPAL2Q9H841 368 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 ABCB10Q9NRK6 738 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 U3KQV3 271 aa13□□□□□ -0.33
SREBF1-221ENST00000583080 TENM3Q9P273 2699 aa12.99□□□□□ -0.33
SREBF1-221ENST00000583080 A0A1W2PPH5 198 aa12.99□□□□□ -0.33
SREBF1-221ENST00000583080 WI2-2373I1.2A0A1W2PRP0 233 aa12.99□□□□□ -0.33
SREBF1-221ENST00000583080 SLC1A7O00341 560 aa12.99□□□□□ -0.33
SREBF1-221ENST00000583080 MAGEA2P43356 314 aa12.99□□□□□ -0.33
SREBF1-221ENST00000583080 VDAC2P45880 294 aaPredicted RBP12.99□□□□□ -0.33
SREBF1-221ENST00000583080 KRTAP10-11P60412 298 aa12.99□□□□□ -0.33
SREBF1-221ENST00000583080 SSX2Q16385 188 aa12.99□□□□□ -0.33
SREBF1-221ENST00000583080 ARSJQ5FYB0 599 aaPredicted RBP12.99□□□□□ -0.33
SREBF1-221ENST00000583080 PLCXD3Q63HM9 321 aa12.99□□□□□ -0.33
SREBF1-221ENST00000583080 CYP2R1Q6VVX0 501 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms