RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 CDK1P06493 297 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 HTR1AP08908 422 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 DCKP27707 260 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 GNALP38405 381 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 PDCD1Q15116 288 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 MICBQ29980 383 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 PRR31Q5SQ13 230 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.31■□□□□ 0.36
CCDC42-203ENST00000581598 SLC35F2Q8IXU6 374 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 TMEM86BQ8N661 226 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 LRRC29Q8WV35 223 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 MYDGFQ969H8 173 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 ITFG2Q969R8 447 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 ITPKCQ96DU7 683 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 MICU1Q9BPX6 476 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 PCGF1Q9BSM1 259 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 SIRPDQ9H106 197 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 RHBDD3Q9Y3P4 386 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 MGAM2Q2M2H8 2515 aa17.31■□□□□ 0.36
CCDC42-203ENST00000581598 CENPVL3A0A0U1RRI6 287 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 MDFIC2A0A1B0GVS7 189 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.3■□□□□ 0.36
CCDC42-203ENST00000581598 DVL1O14640 695 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 TMPRSS2O15393 492 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 HOXA3O43365 443 aaPredicted RBP17.3■□□□□ 0.36
CCDC42-203ENST00000581598 SFTPBP07988 381 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 OR2T7P0C7T2 308 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 ATP6V1E1P36543 226 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 ACTC1P68032 377 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 ACTA1P68133 377 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 METTL11BQ5VVY1 283 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 RNLSQ5VYX0 342 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 Q6YL49 198 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 BTN2A1Q7KYR7 527 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 KRT74Q7RTS7 529 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 OR10Z1Q8NGY1 313 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 OR2T27Q8NH04 317 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 ZDHHC16Q969W1 377 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 TMEM80Q96HE8 168 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 ZNF649Q9BS31 505 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 PAPOLGQ9BWT3 736 aaKnown RBP17.3■□□□□ 0.36
CCDC42-203ENST00000581598 UNKLQ9H9P5 680 aaKnown RBP17.3■□□□□ 0.36
CCDC42-203ENST00000581598 INPP5EQ9NRR6 644 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 MMP24Q9Y5R2 645 aa17.3■□□□□ 0.36
CCDC42-203ENST00000581598 TMEM210A6NLX4 147 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 ANXA2P2A6NMY6 339 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 RGS10O43665 173 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 CST4P01036 141 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 ALOX5APP20292 161 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 PSMA6P60900 246 aaKnown RBP17.29■□□□□ 0.36
CCDC42-203ENST00000581598 FAM76BQ5HYJ3 339 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 PRSS48Q7RTY5 328 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 STX19Q8N4C7 294 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 ACBD7Q8N6N7 88 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 THEM6Q8WUY1 208 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 GATAD2BQ8WXI9 593 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 FAM71F1Q96KD3 344 aaPredicted RBP17.29■□□□□ 0.36
CCDC42-203ENST00000581598 RTL8AQ9BWD3 113 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 CDCA4Q9BXL8 241 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 SLITRK2Q9H156 845 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 BRD7Q9NPI1 651 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 COPS3Q9UNS2 423 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 KLHDC2Q9Y2U9 406 aa17.29■□□□□ 0.36
CCDC42-203ENST00000581598 IGHV3OR15-7A0A075B7D8 119 aa17.28■□□□□ 0.36
CCDC42-203ENST00000581598 GPR37O15354 613 aa17.28■□□□□ 0.36
CCDC42-203ENST00000581598 C21orf33P30042 268 aaPredicted RBP17.28■□□□□ 0.36
CCDC42-203ENST00000581598 ZNF85Q03923 595 aa17.28■□□□□ 0.36
CCDC42-203ENST00000581598 IRF3Q14653 427 aa17.28■□□□□ 0.36
CCDC42-203ENST00000581598 GFOD2Q3B7J2 385 aa17.28■□□□□ 0.36
CCDC42-203ENST00000581598 ATPAF1Q5TC12 328 aaPredicted RBP17.28■□□□□ 0.36
CCDC42-203ENST00000581598 SLC36A1Q7Z2H8 476 aa17.28■□□□□ 0.36
CCDC42-203ENST00000581598 LY6G5BQ8NDX9 201 aa17.28■□□□□ 0.36
CCDC42-203ENST00000581598 OR10H4Q8NGA5 316 aa17.28■□□□□ 0.36
CCDC42-203ENST00000581598 DNTTIP1Q9H147 329 aa17.28■□□□□ 0.36
CCDC42-203ENST00000581598 PPP1R3EQ9H7J1 279 aa17.28■□□□□ 0.36
CCDC42-203ENST00000581598 RPUSD1Q9UJJ7 312 aaKnown RBP17.28■□□□□ 0.36
CCDC42-203ENST00000581598 EXOSC1Q9Y3B2 195 aaKnown RBP17.28■□□□□ 0.36
CCDC42-203ENST00000581598 KPTNQ9Y664 436 aa17.28■□□□□ 0.36
CCDC42-203ENST00000581598 POMT1Q9Y6A1 747 aa17.28■□□□□ 0.36
CCDC42-203ENST00000581598 TMEM14AQ9Y6G1 99 aa17.28■□□□□ 0.36
CCDC42-203ENST00000581598 IGHV1-69DA0A0B4J2H0 117 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 A0A1W2PQL4 384 aaPredicted RBP17.27■□□□□ 0.36
CCDC42-203ENST00000581598 ACOD1A6NK06 481 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 CDIPTO14735 213 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 IGHV1-69P01742 117 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 MT-ND2P03891 347 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 LIMS3P0CW19 117 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 LIMS4P0CW20 117 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 EEF1B2P24534 225 aaKnown RBP17.27■□□□□ 0.36
CCDC42-203ENST00000581598 ACKR3P25106 362 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 HCCSP53701 268 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 PRDX4Q13162 271 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 WDR38Q5JTN6 314 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 RUSC1-AS1Q66K80 236 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 ZNF773Q6PK81 442 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 DEGS2Q6QHC5 323 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 OR5P3Q8WZ94 311 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 TMIGD2Q96BF3 282 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 LYZL4Q96KX0 146 aa17.27■□□□□ 0.36
CCDC42-203ENST00000581598 CNTD2Q9H8S5 307 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms