RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 HPSE2Q8WWQ2 592 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 PGAM5Q96HS1 289 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 DHRS1Q96LJ7 313 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 HIST1H2AAQ96QV6 131 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 SIKE1Q9BRV8 207 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 MCRIP2Q9BUT9 160 aaKnown RBP10.2□□□□□ -0.78
SS18-219ENST00000581570 C1orf21Q9H246 121 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 RGCCQ9H4X1 137 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 BRD7Q9NPI1 651 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 MRGBPQ9NV56 204 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 DNAJC27Q9NZQ0 273 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 ZMAT5Q9UDW3 170 aaKnown RBP10.2□□□□□ -0.78
SS18-219ENST00000581570 CD300AQ9UGN4 299 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 SACSQ9NZJ4 4579 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 RFPL4AA6NLU0 287 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 ODF3BA8MYP8 253 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 RFPL4AL1F8VTS6 287 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 MTRF1O75570 445 aaKnown RBP10.19□□□□□ -0.78
SS18-219ENST00000581570 ZFPL1O95159 310 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 JUNBP17275 347 aaPredicted RBP10.19□□□□□ -0.78
SS18-219ENST00000581570 ACKR3P25106 362 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 AZGP1P25311 298 aaKnown RBP10.19□□□□□ -0.78
SS18-219ENST00000581570 GPM6AP51674 278 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 DGCR2P98153 550 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 SLC34A1Q06495 639 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 DYNC1I2Q13409 638 aaKnown RBP10.19□□□□□ -0.78
SS18-219ENST00000581570 EIF2B1Q14232 305 aaKnown RBP10.19□□□□□ -0.78
SS18-219ENST00000581570 DMRTC1Q5HYR2 192 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 CASC10Q5T4H9 136 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 ZNF626Q68DY1 528 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 ARPINQ7Z6K5 226 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 PIGWQ7Z7B1 504 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 CALHM1Q8IU99 346 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 ZDHHC23Q8IYP9 409 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 CD177Q8N6Q3 437 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 FAM86B1Q8N7N1 296 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 C7orf34Q96L11 122 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 INTS9Q9NV88 658 aaKnown RBP10.19□□□□□ -0.78
SS18-219ENST00000581570 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.19□□□□□ -0.78
SS18-219ENST00000581570 HILPDAQ9Y5L2 63 aa10.19□□□□□ -0.78
SS18-219ENST00000581570 C17orf98A8MV24 154 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 ZNF732B4DXR9 585 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 SLC1A7O00341 560 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 EDF1O60869 148 aaKnown RBP10.18□□□□□ -0.78
SS18-219ENST00000581570 GADD45GO95257 159 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 NCK1P16333 377 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 PRDX2P32119 198 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 SMIM11AP58511 58 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 GNG3P63215 75 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 NKAPLQ5M9Q1 402 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 ZNF770Q6IQ21 691 aaPredicted RBP10.18□□□□□ -0.78
SS18-219ENST00000581570 C10orf99Q6UWK7 81 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 LINC00471Q8N535 108 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 ZNF561Q8N587 486 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 SLC37A3Q8NCC5 494 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 OR11H6Q8NGC7 330 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 OR51D1Q8NGF3 324 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 TFAP2CQ92754 450 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 RCN3Q96D15 328 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 ZNF649Q9BS31 505 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 OR51I2Q9H344 312 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 SAR1AQ9NR31 198 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 RASL12Q9NYN1 266 aa10.18□□□□□ -0.78
SS18-219ENST00000581570 FAM90A22PA8MWA6 464 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 GYPBP06028 91 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 LPLP06858 475 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 PIPP12273 146 aaPredicted RBP10.17□□□□□ -0.78
SS18-219ENST00000581570 IFNGR2P38484 337 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 GSSP48637 474 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 DLX6P56179 175 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 LCN8Q6JVE9 175 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 ETV3LQ6ZN32 361 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 ACP7Q6ZNF0 438 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 OR52L1Q8NGH7 329 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 MUC7Q8TAX7 377 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 GNPDA2Q8TDQ7 276 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 RNF133Q8WVZ7 376 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 CAPSLQ8WWF8 208 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 ASCL2Q99929 193 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 ABHD6Q9BV23 337 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 EGLN3Q9H6Z9 239 aa10.17□□□□□ -0.78
SS18-219ENST00000581570 H0YHG0 523 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 NME4O00746 187 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 CEBPDP49716 269 aaPredicted RBP10.16□□□□□ -0.78
SS18-219ENST00000581570 THBS3P49746 956 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 TSPAN31Q12999 210 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 SMIM21Q3B7S5 101 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 ABCA11PQ4W5N1 156 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 CEP78Q5JTW2 689 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 MINOS1Q5TGZ0 78 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 HAGHLQ6PII5 290 aaPredicted RBP10.16□□□□□ -0.78
SS18-219ENST00000581570 C16orf82Q7Z2V1 217 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 OR6K6Q8NGW6 343 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 NDNFQ8TB73 568 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 AQP3Q92482 292 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 AKR1E2Q96JD6 320 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 LYZL4Q96KX0 146 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 ATP6V1G3Q96LB4 118 aa10.16□□□□□ -0.78
SS18-219ENST00000581570 LSM4Q9Y4Z0 139 aaKnown RBP10.16□□□□□ -0.78
SS18-219ENST00000581570 MINOS1-NBL1R4GNA1 71 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms