RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CPN2P22792 545 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 GNRHRP30968 328 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 PRSS3P35030 304 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 GDI2P50395 445 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 ERFP50548 548 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 RBX1P62877 108 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 IFFO1Q0D2I5 559 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 HHATQ5VTY9 493 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 EPGNQ6UW88 154 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 SLC25A29Q8N8R3 303 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 OR5M1Q8NGP8 315 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 OR51A7Q8NH64 312 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 NDNFQ8TB73 568 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 MRPL48Q96GC5 212 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 SMARCD1Q96GM5 515 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 CENPNQ96H22 339 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 GAL3ST2Q9H3Q3 398 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 LINC00574Q9H8X3 128 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 CA10Q9NS85 328 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 CHTOPQ9Y3Y2 248 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 ENPP4Q9Y6X5 453 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 TNIKQ9UKE5 1360 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 LOXHD1Q8IVV2 1947 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 MYO15BQ96JP2 1530 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 A8MWL6 223 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 PRAMEF26H0Y7S4 382 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 H7C2Y5 167 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 GMDSO60547 372 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 CNMDO75829 334 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 NELFEP18615 380 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 CD9P21926 228 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 TGFBR1P36897 503 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 GALR1P47211 349 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 RPL31P62899 125 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 BTN1A1Q13410 526 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 DUPD1Q68J44 220 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 CASP12Q6UXS9 341 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 KLF14Q8TD94 323 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 HGDQ93099 445 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 FAM131CQ96AQ9 280 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 RNF170Q96K19 258 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 TSNAXQ99598 290 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 DHCR7Q9UBM7 475 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 RWDD2AQ9UIY3 292 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 TRIP11Q15643 1979 aa2.48□□□□□ -2.01
SMCHD1-205ENST00000581383 IGKV1-6A0A0C4DH72 117 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 A0A0G2JMP0 313 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 A0A0X1KG70 313 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 C16orf90A8MZG2 172 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 MFNGO00587 321 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 KDELR3O43731 214 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 OR7C2O60412 319 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 IGKV1-39P01597 117 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 IGKV1D-39P04432 117 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 PAX6P26367 422 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 MLF1P58340 268 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 TAS2R60P59551 318 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 GRB2P62993 217 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 ADIGQ0VDE8 80 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 STK38Q15208 465 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 SP6Q3SY56 376 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 CAVIN4Q5BKX8 364 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 C6orf183Q5T699 404 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 KPRPQ5T749 579 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 FAM27D1Q5T7N8 215 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 BBS7Q8IWZ6 715 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 OR52K1Q8NGK4 314 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 FRMD8P1Q9BZ68 369 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 TBL1XR1Q9BZK7 514 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 C6orf50Q9HD87 102 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 RAB22AQ9UL26 194 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 CFL2Q9Y281 166 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 SIGLEC1Q9BZZ2 1709 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 JCADQ9P266 1359 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 DCAF1Q9Y4B6 1507 aa2.47□□□□□ -2.01
SMCHD1-205ENST00000581383 A0A0J9YYE9 177 aa2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 FAM240AA0A1B0GVK7 77 aa2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 NDUFS5O43920 106 aa2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 CSTAP01040 98 aa2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 TRBC1P01850 177 aa2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 PTNP21246 168 aa2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 MPV17P39210 176 aa2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 CARD18P57730 90 aa2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 MAD2L1BPQ15013 274 aaPredicted RBP2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 HNRNPA1L2Q32P51 320 aaKnown RBP2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 NDUFAF6Q330K2 333 aa2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 SPINT4Q6UDR6 99 aa2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 PDPNQ86YL7 162 aa2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 ASCC1Q8N9N2 400 aaKnown RBP2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 OR2M7Q8NG81 312 aa2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 C20orf144Q9BQM9 153 aa2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 BZW2Q9Y6E2 419 aaKnown RBP2.46□□□□□ -2.02
SMCHD1-205ENST00000581383 AQRO60306 1485 aaKnown RBP eCLIP2.45□□□□□ -2.023e-8■■■■□ 24.7
SMCHD1-205ENST00000581383 KIAA1671Q9BY89 1806 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 NPHP4O75161 1426 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 SHANK1Q9Y566 2161 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 TMEM72A0PK05 275 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 SEC14L6B5MCN3 397 aa2.45□□□□□ -2.02
SMCHD1-205ENST00000581383 RHOCP08134 193 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms