RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 WDR13Q9H1Z4 485 aa11.9□□□□□ -0.5
SMARCE1-216ENST00000580419 PPP1R3EQ9H7J1 279 aa11.9□□□□□ -0.5
SMARCE1-216ENST00000580419 SEBOXQ9HB31 216 aaPredicted RBP11.9□□□□□ -0.5
SMARCE1-216ENST00000580419 TVP23BQ9NYZ1 205 aa11.9□□□□□ -0.5
SMARCE1-216ENST00000580419 ENPP5Q9UJA9 477 aa11.9□□□□□ -0.5
SMARCE1-216ENST00000580419 FAM96BQ9Y3D0 163 aa11.9□□□□□ -0.5
SMARCE1-216ENST00000580419 IGKV1D-17A0A075B6S4 117 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 A0A0U1RQK1 487 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 ZAR1LA6NP61 321 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 RNASEK-C17orf49H0YIS7 233 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 TIMM23O14925 209 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 GSC2O15499 205 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 MPZP25189 248 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 TGFBR2P37173 567 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 DAPP51397 102 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 GPM6AP51674 278 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 TMED1Q13445 227 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 BLMHQ13867 455 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 ATP6AP1Q15904 470 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 SMIM21Q3B7S5 101 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 SLX4IPQ5VYV7 408 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 KDM4DQ6B0I6 523 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 CALHM1Q8IU99 346 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 GID4Q8IVV7 300 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 ELMOD2Q8IZ81 293 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 POC1AQ8NBT0 407 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 BCAS4Q8TDM0 211 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 GPR84Q9NQS5 396 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 CLN6Q9NWW5 311 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 VPREB3Q9UKI3 123 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 POLDIP2Q9Y2S7 368 aa11.89□□□□□ -0.51
SMARCE1-216ENST00000580419 TGP01266 2768 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 A0A1B0GW55 424 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 A0A1W2PPH5 198 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 BTBD17A6NE02 478 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 ZNF732B4DXR9 585 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 NPFFO15130 113 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 AKR7A2O43488 359 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 ATP5HO75947 161 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 IGHV4-59P01825 116 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 TTRP02766 147 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 DUX4L2P0CJ85 424 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 DUX4L3P0CJ86 424 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 DUX4L4P0CJ87 422 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 DUX4L5P0CJ88 424 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 DUX4L6P0CJ89 424 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 DUX4L7P0CJ90 424 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 PSG2P11465 335 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 FCGR1AP12314 374 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 CCL1P22362 96 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 PROK1P58294 105 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 POU4F2Q12837 409 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 BNIP1Q12981 228 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 DGUOKQ16854 277 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 CLVS2Q5SYC1 327 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 TMEM236Q5W0B7 351 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 C12orf73Q69YU5 71 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 C11orf88Q6PI97 169 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 DUX4L9Q6RFH8 374 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 ZNF322Q6U7Q0 402 aaPredicted RBP11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 KCTD8Q6ZWB6 473 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 THAP5Q7Z6K1 395 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 ZNF561Q8N587 486 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 BEND2Q8NDZ0 799 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 LINC01006Q8NI28 216 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 TMEM163Q8TC26 289 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 C10orf35Q96D05 121 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 FAM234AQ9H0X4 552 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 ONECUT1Q9UBC0 465 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 DUX4Q9UBX2 424 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 SF3B6Q9Y3B4 125 aaKnown RBP11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 MAB21L2Q9Y586 359 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 V9GYS6 101 aa11.88□□□□□ -0.51
SMARCE1-216ENST00000580419 G3V2T6 193 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 J3QT63 122 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 WIPF1O43516 503 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 PRKYO43930 277 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 SULT1C4O75897 302 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 NRASP01111 189 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 PGA5P0DJD9 388 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 IKZF1Q13422 519 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 ZNF684Q5T5D7 378 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 ACP7Q6ZNF0 438 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 ZDHHC13Q8IUH4 622 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 OR51E1Q8TCB6 317 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 SEH1LQ96EE3 360 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 CADM1Q9BY67 442 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 MEGF9Q9H1U4 602 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 ADGRL4Q9HBW9 690 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 HES4Q9HCC6 221 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 KRT84Q9NSB2 600 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 H2AFY2Q9P0M6 372 aaPredicted RBP11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 WARS2Q9UGM6 360 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 RNF114Q9Y508 228 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 SNX5Q9Y5X3 404 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 R4GMQ9 66 aa11.87□□□□□ -0.51
SMARCE1-216ENST00000580419 hCG_1809904A0A1W2PP81 198 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 A0A1W2PPE2 198 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 A0A1W2PR64 198 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms