RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 TBRG1Q3YBR2 411 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 HIKESHIQ53FT3 197 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 C1orf100Q5SVJ3 147 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 SFRP5Q5T4F7 317 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 ZNF57Q68EA5 555 aaPredicted RBP8.74□□□□□ -1.01
SS18-210ENST00000578700 UNQ6126/PRO20091Q6UXV3 157 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 DCDC5Q6ZRR9 648 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 UTS2BQ765I0 119 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 PRSS45Q7RTY3 260 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 SNX29P2Q8IUI4 249 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 C1orf162Q8NEQ5 155 aaPredicted RBP8.74□□□□□ -1.01
SS18-210ENST00000578700 OR4M2Q8NGB6 313 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 OR51D1Q8NGF3 324 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 OR5L1Q8NGL2 311 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 OR5H6Q8NGV6 325 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 OR14K1Q8NGZ2 314 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 BCL2L2Q92843 193 aaPredicted RBP8.74□□□□□ -1.01
SS18-210ENST00000578700 RFT1Q96AA3 541 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 APOBEC3DQ96AK3 386 aaPredicted RBP8.74□□□□□ -1.01
SS18-210ENST00000578700 SGK3Q96BR1 496 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 ADAT3Q96EY9 351 aaPredicted RBP8.74□□□□□ -1.01
SS18-210ENST00000578700 TECTBQ96PL2 329 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 SOSTQ9BQB4 213 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 SLC22A4Q9H015 551 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 MOV10Q9HCE1 1003 aaKnown RBP8.74□□□□□ -1.01
SS18-210ENST00000578700 EIF3KQ9UBQ5 218 aaKnown RBP8.74□□□□□ -1.01
SS18-210ENST00000578700 PLCE1Q9P212 2302 aa8.74□□□□□ -1.01
SS18-210ENST00000578700 FREM1Q5H8C1 2179 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 A0A0B4J203 849 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 A0A1W2PQ09 198 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 LMX1BO60663 402 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 BPNT1O95861 308 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 IGLV3-1P01715 115 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 ALDOBP05062 364 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 ITGA5P08648 1049 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 DANCRP0C864 163 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 PRKACBP22694 351 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 IL32P24001 234 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 POU3F4P49335 361 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 MMP15P51511 669 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 AP3S2P59780 193 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 IFITM3Q01628 133 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 MADCAM1Q13477 382 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 ASAH1Q13510 395 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 OXA1LQ15070 435 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 RSPO1Q2MKA7 263 aaPredicted RBP8.73□□□□□ -1.01
SS18-210ENST00000578700 C2orf76Q3KRA6 126 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 KRTAP27-1Q3LI81 207 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 ZNF672Q499Z4 452 aaPredicted RBP8.73□□□□□ -1.01
SS18-210ENST00000578700 NCMAPQ5T1S8 102 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 ZBTB37Q5TC79 503 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 ADAM5Q6NVV9 412 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 Q6ZNX1 250 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 MRPL21Q7Z2W9 205 aaKnown RBP8.73□□□□□ -1.01
SS18-210ENST00000578700 NAA40Q86UY6 237 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 CMTM4Q8IZR5 234 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 C17orf78Q8N4C9 275 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 STEAP2Q8NFT2 490 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 OR51A2Q8NGJ7 313 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 FGFBP3Q8TAT2 258 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 FCAMRQ8WWV6 532 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 PTX4Q96A99 478 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 HAVCR1Q96D42 359 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 THAP7Q9BT49 309 aaPredicted RBP8.73□□□□□ -1.01
SS18-210ENST00000578700 C19orf24Q9BVV8 132 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 C1QTNF5Q9BXJ0 243 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 ATG5Q9H1Y0 275 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 ESRP2Q9H6T0 727 aaKnown RBP8.73□□□□□ -1.01
SS18-210ENST00000578700 OBP2BQ9NPH6 170 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 ZNF319Q9P2F9 582 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 CGGBP1Q9UFW8 167 aaPredicted RBP8.73□□□□□ -1.01
SS18-210ENST00000578700 CDC42EP3Q9UKI2 254 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 SLC7A11Q9UPY5 501 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 ALPK2Q86TB3 2170 aa8.73□□□□□ -1.01
SS18-210ENST00000578700 hCG_2014768A0A024R1R8 64 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 IGHV4-30-2A0A087WSY4 118 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 A0A0A6YYH2 397 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 LINC00854A0A1B0GVQ3 168 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 A6NIN4 97 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 A6NJ64 397 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 J3QW42 95 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 CTDSPLO15194 276 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 PFDN1O60925 122 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 RAD51DO75771 328 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 ALX3O95076 343 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 CSF3P09919 207 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 GSTT2BP0CG30 244 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 FAHP16930 419 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 RAB6AP20340 208 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 PSMB1P20618 241 aaKnown RBP8.72□□□□□ -1.01
SS18-210ENST00000578700 MNDAP41218 407 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 TAB1Q15750 504 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 BAK1Q16611 211 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 SNAI3Q3KNW1 292 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 CLVS2Q5SYC1 327 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 AWAT2Q6E213 333 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 RAB12Q6IQ22 244 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 ZNF101Q8IZC7 436 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 CPEB3Q8NE35 698 aaKnown RBP8.72□□□□□ -1.01
SS18-210ENST00000578700 SLC30A7Q8NEW0 376 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms