RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 GNB2P62879 340 aa16.1■□□□□ 0.17
SS18-208ENST00000577751 MICBQ29980 383 aa16.1■□□□□ 0.17
SS18-208ENST00000577751 WDR25Q64LD2 544 aaPredicted RBP16.1■□□□□ 0.17
SS18-208ENST00000577751 HAVCR2Q8TDQ0 301 aa16.1■□□□□ 0.17
SS18-208ENST00000577751 AQP3Q92482 292 aa16.1■□□□□ 0.17
SS18-208ENST00000577751 DACT3Q96B18 629 aaPredicted RBP16.1■□□□□ 0.17
SS18-208ENST00000577751 C12orf43Q96C57 262 aaKnown RBP16.1■□□□□ 0.17
SS18-208ENST00000577751 PLEKHA1Q9HB21 404 aa16.1■□□□□ 0.17
SS18-208ENST00000577751 KAAG1Q9UBP8 84 aa16.1■□□□□ 0.17
SS18-208ENST00000577751 DIMT1Q9UNQ2 313 aaKnown RBP16.1■□□□□ 0.17
SS18-208ENST00000577751 INSIG2Q9Y5U4 225 aa16.1■□□□□ 0.17
SS18-208ENST00000577751 JMJD1CQ15652 2540 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 IGHV3OR15-7A0A075B7D8 119 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 PQLC2LA1A4F0 135 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 RHBDL1O75783 438 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 GYPAP02724 150 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 TGM4P49221 684 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 NPY4RP50391 375 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 ETV1P50549 477 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 UBE2V2Q15819 145 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 GGHQ92820 318 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 SEH1LQ96EE3 360 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 CHST5Q9GZS9 411 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 WDR13Q9H1Z4 485 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 C7orf69Q9H7B7 122 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 PLCXD1Q9NUJ7 323 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 ERVK-18Q9QC07 812 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 CLN8Q9UBY8 286 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 OPN4Q9UHM6 478 aa16.09■□□□□ 0.17
SS18-208ENST00000577751 CAB39Q9Y376 341 aaPredicted RBP16.09■□□□□ 0.17
SS18-208ENST00000577751 AKR7A2O43488 359 aa16.08■□□□□ 0.16
SS18-208ENST00000577751 ADAM20O43506 726 aa16.08■□□□□ 0.16
SS18-208ENST00000577751 PIPP12273 146 aaPredicted RBP16.08■□□□□ 0.16
SS18-208ENST00000577751 GBX2P52951 348 aaPredicted RBP16.08■□□□□ 0.16
SS18-208ENST00000577751 AQP4P55087 323 aa16.08■□□□□ 0.16
SS18-208ENST00000577751 ATPAF1Q5TC12 328 aaPredicted RBP16.08■□□□□ 0.16
SS18-208ENST00000577751 ZNF573Q86YE8 665 aa16.08■□□□□ 0.16
SS18-208ENST00000577751 OR10AC1Q8NH08 325 aa16.08■□□□□ 0.16
SS18-208ENST00000577751 ZNF671Q8TAW3 534 aa16.08■□□□□ 0.16
SS18-208ENST00000577751 PP6455Q8WZ26 134 aa16.08■□□□□ 0.16
SS18-208ENST00000577751 ADAT3Q96EY9 351 aaPredicted RBP16.08■□□□□ 0.16
SS18-208ENST00000577751 TMEM80Q96HE8 168 aa16.08■□□□□ 0.16
SS18-208ENST00000577751 TECTBQ96PL2 329 aa16.08■□□□□ 0.16
SS18-208ENST00000577751 OR5V1Q9UGF6 321 aa16.08■□□□□ 0.16
SS18-208ENST00000577751 HHLA2Q9UM44 414 aa16.08■□□□□ 0.16
SS18-208ENST00000577751 H0YHG0 523 aa16.07■□□□□ 0.16
SS18-208ENST00000577751 FCN3O75636 299 aa16.07■□□□□ 0.16
SS18-208ENST00000577751 GATBO75879 557 aaKnown RBP16.07■□□□□ 0.16
SS18-208ENST00000577751 ZFPL1O95159 310 aa16.07■□□□□ 0.16
SS18-208ENST00000577751 IFNA2P01563 188 aa16.07■□□□□ 0.16
SS18-208ENST00000577751 AMY2BP19961 511 aa16.07■□□□□ 0.16
SS18-208ENST00000577751 HAAOP46952 286 aa16.07■□□□□ 0.16
SS18-208ENST00000577751 PAX8Q06710 450 aa16.07■□□□□ 0.16
SS18-208ENST00000577751 RIPK1Q13546 671 aa16.07■□□□□ 0.16
SS18-208ENST00000577751 STUMQ69YW2 141 aa16.07■□□□□ 0.16
SS18-208ENST00000577751 HAGHLQ6PII5 290 aaPredicted RBP16.07■□□□□ 0.16
SS18-208ENST00000577751 TEX29Q8N6K0 151 aa16.07■□□□□ 0.16
SS18-208ENST00000577751 OR51A4Q8NGJ6 313 aa16.07■□□□□ 0.16
SS18-208ENST00000577751 RAB40AQ8WXH6 277 aa16.07■□□□□ 0.16
SS18-208ENST00000577751 CNOT2Q9NZN8 540 aaKnown RBP16.07■□□□□ 0.16
SS18-208ENST00000577751 PSORS1C1Q9UIG5 152 aa16.07■□□□□ 0.16
SS18-208ENST00000577751 EXOSC1Q9Y3B2 195 aaKnown RBP16.07■□□□□ 0.16
SS18-208ENST00000577751 LOC105371242A0A075B767 164 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 KIR2DS1A0A191URI9 304 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 J3QT63 122 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 TMPRSS2O15393 492 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 XPNPEP2O43895 674 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 NOS1APO75052 506 aaPredicted RBP16.06■□□□□ 0.16
SS18-208ENST00000577751 SERPINA3P01011 423 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 RPSAP08865 295 aaKnown RBP16.06■□□□□ 0.16
SS18-208ENST00000577751 GLRA1P23415 457 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 MPZP25189 248 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 SRP14P37108 136 aaKnown RBP16.06■□□□□ 0.16
SS18-208ENST00000577751 GTF2A1P52655 376 aaPredicted RBP16.06■□□□□ 0.16
SS18-208ENST00000577751 ST3GAL4Q11206 333 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 CCDC58Q4VC31 144 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 OR2G6Q5TZ20 316 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 TMPRSS11AQ6ZMR5 421 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 UTS2BQ765I0 119 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 CALHM1Q8IU99 346 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 ZNF676Q8N7Q3 588 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 RPS4Y2Q8TD47 263 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 FGGYQ96C11 551 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 DNTTIP1Q9H147 329 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 SMURF1Q9HCE7 757 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 CLEC2DQ9UHP7 191 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 SLC7A11Q9UPY5 501 aa16.06■□□□□ 0.16
SS18-208ENST00000577751 IGHV2-70DA0A0C4DH43 119 aa16.05■□□□□ 0.16
SS18-208ENST00000577751 EFCAB10A6NFE3 127 aa16.05■□□□□ 0.16
SS18-208ENST00000577751 TMEM212A6NML5 194 aa16.05■□□□□ 0.16
SS18-208ENST00000577751 SYNGR1O43759 233 aa16.05■□□□□ 0.16
SS18-208ENST00000577751 FSHBP01225 129 aa16.05■□□□□ 0.16
SS18-208ENST00000577751 ACAA1P09110 424 aaPredicted RBP16.05■□□□□ 0.16
SS18-208ENST00000577751 CCDC159P0C7I6 412 aa16.05■□□□□ 0.16
SS18-208ENST00000577751 MYL12AP19105 171 aa16.05■□□□□ 0.16
SS18-208ENST00000577751 FUT6P51993 359 aa16.05■□□□□ 0.16
SS18-208ENST00000577751 GMFBP60983 142 aa16.05■□□□□ 0.16
SS18-208ENST00000577751 C11orf91Q3C1V1 193 aa16.05■□□□□ 0.16
SS18-208ENST00000577751 XAF1Q6GPH4 301 aa16.05■□□□□ 0.16
SS18-208ENST00000577751 RPL22L1Q6P5R6 122 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms