RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 OR5L1Q8NGL2 311 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 OR5H6Q8NGV6 325 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 OR14K1Q8NGZ2 314 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 BCL2L2Q92843 193 aaPredicted RBP8.74□□□□□ -1.01
SS18-207ENST00000577636 RFT1Q96AA3 541 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 APOBEC3DQ96AK3 386 aaPredicted RBP8.74□□□□□ -1.01
SS18-207ENST00000577636 SGK3Q96BR1 496 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 ADAT3Q96EY9 351 aaPredicted RBP8.74□□□□□ -1.01
SS18-207ENST00000577636 TECTBQ96PL2 329 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 SOSTQ9BQB4 213 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 SLC22A4Q9H015 551 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 MOV10Q9HCE1 1003 aaKnown RBP8.74□□□□□ -1.01
SS18-207ENST00000577636 EIF3KQ9UBQ5 218 aaKnown RBP8.74□□□□□ -1.01
SS18-207ENST00000577636 A0A0B4J203 849 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 A0A1W2PQ09 198 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 LMX1BO60663 402 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 BPNT1O95861 308 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 IGLV3-1P01715 115 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 ALDOBP05062 364 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 ITGA5P08648 1049 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 DANCRP0C864 163 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 PRKACBP22694 351 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 IL32P24001 234 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 POU3F4P49335 361 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 MMP15P51511 669 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 AP3S2P59780 193 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 IFITM3Q01628 133 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 MADCAM1Q13477 382 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 ASAH1Q13510 395 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 OXA1LQ15070 435 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 RSPO1Q2MKA7 263 aaPredicted RBP8.73□□□□□ -1.01
SS18-207ENST00000577636 C2orf76Q3KRA6 126 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 KRTAP27-1Q3LI81 207 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 ZNF672Q499Z4 452 aaPredicted RBP8.73□□□□□ -1.01
SS18-207ENST00000577636 NCMAPQ5T1S8 102 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 ZBTB37Q5TC79 503 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 ADAM5Q6NVV9 412 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 Q6ZNX1 250 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 MRPL21Q7Z2W9 205 aaKnown RBP8.73□□□□□ -1.01
SS18-207ENST00000577636 NAA40Q86UY6 237 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 CMTM4Q8IZR5 234 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 C17orf78Q8N4C9 275 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 STEAP2Q8NFT2 490 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 OR51A2Q8NGJ7 313 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 FGFBP3Q8TAT2 258 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 FCAMRQ8WWV6 532 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 PTX4Q96A99 478 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 HAVCR1Q96D42 359 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 THAP7Q9BT49 309 aaPredicted RBP8.73□□□□□ -1.01
SS18-207ENST00000577636 C19orf24Q9BVV8 132 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 C1QTNF5Q9BXJ0 243 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 ATG5Q9H1Y0 275 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 ESRP2Q9H6T0 727 aaKnown RBP8.73□□□□□ -1.01
SS18-207ENST00000577636 OBP2BQ9NPH6 170 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 ZNF319Q9P2F9 582 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 CGGBP1Q9UFW8 167 aaPredicted RBP8.73□□□□□ -1.01
SS18-207ENST00000577636 CDC42EP3Q9UKI2 254 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 SLC7A11Q9UPY5 501 aa8.73□□□□□ -1.01
SS18-207ENST00000577636 STAB1Q9NY15 2570 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 hCG_2014768A0A024R1R8 64 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 IGHV4-30-2A0A087WSY4 118 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 A0A0A6YYH2 397 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 LINC00854A0A1B0GVQ3 168 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 A6NIN4 97 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 A6NJ64 397 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 J3QW42 95 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 CTDSPLO15194 276 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 PFDN1O60925 122 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 RAD51DO75771 328 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 ALX3O95076 343 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 CSF3P09919 207 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 GSTT2BP0CG30 244 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 FAHP16930 419 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 RAB6AP20340 208 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 PSMB1P20618 241 aaKnown RBP8.72□□□□□ -1.01
SS18-207ENST00000577636 MNDAP41218 407 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 TAB1Q15750 504 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 BAK1Q16611 211 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 SNAI3Q3KNW1 292 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 CLVS2Q5SYC1 327 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 AWAT2Q6E213 333 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 RAB12Q6IQ22 244 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 ZNF101Q8IZC7 436 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 CPEB3Q8NE35 698 aaKnown RBP8.72□□□□□ -1.01
SS18-207ENST00000577636 SLC30A7Q8NEW0 376 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 ENKURQ8TC29 256 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 SPSB1Q96BD6 273 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 SDHCQ99643 169 aaPredicted RBP8.72□□□□□ -1.01
SS18-207ENST00000577636 CHST5Q9GZS9 411 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 SHARPINQ9H0F6 387 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 CST11Q9H112 138 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 CDH20Q9HBT6 801 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 NGBQ9NPG2 151 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 TBCCD1Q9NVR7 557 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 CISD1Q9NZ45 108 aaKnown RBP8.72□□□□□ -1.01
SS18-207ENST00000577636 GHRLQ9UBU3 117 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 MRPS28Q9Y2Q9 187 aaKnown RBP8.72□□□□□ -1.01
SS18-207ENST00000577636 PRR14LQ5THK1 2151 aa8.72□□□□□ -1.01
SS18-207ENST00000577636 ZNF816-ZNF321PA0A0X1KG74 233 aa8.71□□□□□ -1.02
SS18-207ENST00000577636 DPRXA6NFQ7 191 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms