RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ZNF593O00488 134 aaPredicted RBP12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 NPPAP01160 153 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 CD24P25063 80 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 HSD11B1P28845 292 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 DCTDP32321 178 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 SLC15A1P46059 708 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 GPM6AP51674 278 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 SNCBQ16143 134 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 ZNF626Q68DY1 528 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 CBLL1Q75N03 491 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 CD177Q8N6Q3 437 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 BCAS4Q8TDM0 211 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 HIST1H2AAQ96QV6 131 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 OR10A2Q9H208 303 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 ZNF319Q9P2F9 582 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 COMMD3-BMI1R4GMX3 469 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 CSMD3Q7Z407 3707 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 GSTA4O15217 222 aa12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 IDH3BO43837 385 aa12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 SERPINA1P01009 418 aa12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 ENTPD1P49961 510 aa12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 GRB2P62993 217 aaKnown RBP12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 EIF2B1Q14232 305 aaKnown RBP12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 C8orf86Q6ZUL3 223 aa12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 ZNF511Q8NB15 262 aa12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 OR11H6Q8NGC7 330 aa12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 OR2T4Q8NH00 348 aa12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 ZNF671Q8TAW3 534 aa12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 NDNFQ8TB73 568 aa12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 HPSE2Q8WWQ2 592 aa12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 PGAM5Q96HS1 289 aa12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 AKR1E2Q96JD6 320 aa12.96□□□□□ -0.33
CTDNEP1-211ENST00000575783 STARD9Q9P2P6 4700 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 DHRS12A0PJE2 317 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 C17orf98A8MV24 154 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 FAM90A22PA8MWA6 464 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 NUDT19A8MXV4 375 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 CXCR6O00574 342 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 MTRF1O75570 445 aaKnown RBP12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 DIRAS1O95057 198 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 ACKR3P25106 362 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 PRDX2P32119 198 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 DLX6P56179 175 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 RAB25P57735 213 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 ZNF121P58317 390 aaPredicted RBP12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 C9orf152Q5JTZ5 239 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 ZFAND6Q6FIF0 208 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 ZNF770Q6IQ21 691 aaPredicted RBP12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 LCN8Q6JVE9 175 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 C18orf65Q6ZTR6 163 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 PRSS45Q7RTY3 260 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 ZNF329Q86UD4 541 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 CALHM1Q8IU99 346 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 ZDHHC23Q8IYP9 409 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 ZNF561Q8N587 486 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 RCHY1Q96PM5 261 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 TMBIM4Q9HC24 238 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 ABCB9Q9NP78 766 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 GID8Q9NWU2 228 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 NDUFAF4Q9P032 175 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 HYDINQ4G0P3 5121 aa12.95□□□□□ -0.34
CTDNEP1-211ENST00000575783 ZNF732B4DXR9 585 aa12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 SLC22A2O15244 555 aa12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 CST4P01036 141 aa12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 FMO3P31513 532 aa12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 MYCNOSP40205 109 aa12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 LUMP51884 338 aaPredicted RBP12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 RPL23AP62750 156 aaKnown RBP12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 COQ5Q5HYK3 327 aa12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 DYDC1Q8WWB3 177 aa12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 STMN2Q93045 179 aa12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 ZNF488Q96MN9 340 aa12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 DUX3Q96PT4 197 aa12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 OR51I2Q9H344 312 aa12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 CMTM6Q9NX76 183 aa12.94□□□□□ -0.34
CTDNEP1-211ENST00000575783 A0A0G2JND7 137 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 PSMB11A5LHX3 300 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 APOC1P02654 83 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 RHCEP18577 417 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 ECI1P42126 302 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 CEP78Q5JTW2 689 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 ACP7Q6ZNF0 438 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 C16orf82Q7Z2V1 217 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 OSR2Q8N2R0 312 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 FAM86B1Q8N7N1 296 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 STON2Q8WXE9 905 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 RGCCQ9H4X1 137 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 LIN7BQ9HAP6 207 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 VNN3Q9NY84 501 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 RASL12Q9NYN1 266 aa12.93□□□□□ -0.34
CTDNEP1-211ENST00000575783 BBIP1A8MTZ0 92 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 TK1P04183 234 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 GYPBP06028 91 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 ZNF728P0DKX0 622 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 IGHV1-8P0DP01 117 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 CHATP28329 748 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 ACTA2P62736 377 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 GNG3P63215 75 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 ACTG2P63267 376 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 ACTC1P68032 377 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms