RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 OR51D1Q8NGF3 324 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 OR51L1Q8NGJ5 315 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 RP9Q8TA86 221 aaKnown RBP7.24□□□□□ -1.25
SMG6-218ENST00000575454 GNPDA2Q8TDQ7 276 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 RNF133Q8WVZ7 376 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 KCTD14Q9BQ13 255 aaPredicted RBP7.24□□□□□ -1.25
SMG6-218ENST00000575454 CHID1Q9BWS9 393 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 YY1AP1Q9H869 796 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 VIPAS39Q9H9C1 493 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 ELL3Q9HB65 397 aaPredicted RBP7.24□□□□□ -1.25
SMG6-218ENST00000575454 INPP5EQ9NRR6 644 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 U3KQK5 164 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 ODF3BA8MYP8 253 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 LMO1P25800 156 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 HOXD3P31249 432 aaPredicted RBP7.23□□□□□ -1.25
SMG6-218ENST00000575454 PRDX2P32119 198 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 GSSP48637 474 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 GPM6AP51674 278 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 ZNF121P58317 390 aaPredicted RBP7.23□□□□□ -1.25
SMG6-218ENST00000575454 GNG3P63215 75 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 DOC2BQ14184 412 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 EIF2B1Q14232 305 aaKnown RBP7.23□□□□□ -1.25
SMG6-218ENST00000575454 KLHL12Q53G59 568 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 PLA1AQ53H76 456 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 MINOS1Q5TGZ0 78 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 LCN8Q6JVE9 175 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 SHFQ7M4L6 423 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.23□□□□□ -1.25
SMG6-218ENST00000575454 ZNF511Q8NB15 262 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 SLC37A3Q8NCC5 494 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 OR11H6Q8NGC7 330 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 OR2T27Q8NH04 317 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 PIGCQ92535 297 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 MYDGFQ969H8 173 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 MCUR1Q96AQ8 359 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 RCN3Q96D15 328 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 OR51I2Q9H344 312 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 PPP1R3EQ9H7J1 279 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 DCAF13Q9NV06 445 aaKnown RBP7.23□□□□□ -1.25
SMG6-218ENST00000575454 DNAJC27Q9NZQ0 273 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 CDH10Q9Y6N8 788 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 MINOS1-NBL1R4GNA1 71 aa7.23□□□□□ -1.25
SMG6-218ENST00000575454 OR5B21A6NL26 309 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 RFPL4AA6NLU0 287 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 C17orf98A8MV24 154 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 HMGB1P1B2RPK0 211 aaPredicted RBP7.22□□□□□ -1.25
SMG6-218ENST00000575454 ZNF732B4DXR9 585 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 RFPL4AL1F8VTS6 287 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 NME4O00746 187 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 DIRAS1O95057 198 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 IFNGP01579 166 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 TFF1P04155 84 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 H2BFMP0C1H6 154 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 NCK1P16333 377 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 SPI1P17947 270 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 SLC6A1P30531 599 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 OPRL1P41146 370 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 NUDT2P50583 147 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 ARHGDIBP52566 201 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 SLC34A1Q06495 639 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 DYNC1I2Q13409 638 aaKnown RBP7.22□□□□□ -1.25
SMG6-218ENST00000575454 IL18R1Q13478 541 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 CEACAM21Q3KPI0 293 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 ZNF626Q68DY1 528 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 GLYATQ6IB77 296 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 ZNF770Q6IQ21 691 aaPredicted RBP7.22□□□□□ -1.25
SMG6-218ENST00000575454 ZNF782Q6ZMW2 699 aaPredicted RBP7.22□□□□□ -1.25
SMG6-218ENST00000575454 ZBTB49Q6ZSB9 765 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 KRT74Q7RTS7 529 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 DYNAPQ8N1N2 210 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 LINC00471Q8N535 108 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 LINC00482Q8N8I6 264 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 OR4M1Q8NGD0 313 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 OR5A2Q8NGI9 324 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 OR6K6Q8NGW6 343 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 FAM81AQ8TBF8 368 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 ZNRF4Q8WWF5 429 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 HPSE2Q8WWQ2 592 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 INTS14Q96SY0 518 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 ABHD6Q9BV23 337 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 NIPAL2Q9H841 368 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 EFCAB1Q9HAE3 211 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 BRD7Q9NPI1 651 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 GMPR2Q9P2T1 348 aaKnown RBP7.22□□□□□ -1.25
SMG6-218ENST00000575454 BAIAP2Q9UQB8 552 aa7.22□□□□□ -1.25
SMG6-218ENST00000575454 FAM90A22PA8MWA6 464 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 RAMP3O60896 148 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 DNAJC8O75937 253 aaPredicted RBP7.21□□□□□ -1.26
SMG6-218ENST00000575454 KRT36O76013 467 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 TK1P04183 234 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 ZNF728P0DKX0 622 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 PSKH1P11801 424 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 ATP6V1B1P15313 513 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 CCL3L1P16619 93 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 ACKR3P25106 362 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 MAP2K3P46734 347 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 GP2P55259 537 aaKnown RBP7.21□□□□□ -1.26
SMG6-218ENST00000575454 DGCR2P98153 550 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 TMEM95Q3KNT9 176 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 TCTEX1D4Q5JR98 221 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms