RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 NAXEQ8NCW5 288 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 NOP16Q9Y3C1 178 aaKnown RBP12.19□□□□□ -0.46
VPS33B-208ENST00000574755 C5orf49A4QMS7 147 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 SERPINE3A8MV23 424 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 CCL2P13500 99 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 AMY2BP19961 511 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 NUBP1P53384 320 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 GK2Q14410 553 aaPredicted RBP12.19□□□□□ -0.46
VPS33B-208ENST00000574755 ARL6IP1Q15041 203 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 GRK1Q15835 563 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 C6orf183Q5T699 404 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 PIGCQ92535 297 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 ELMOD3Q96FG2 381 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 WDYHV1Q96HA8 205 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 DPCDQ9BVM2 203 aaPredicted RBP12.19□□□□□ -0.46
VPS33B-208ENST00000574755 C12orf49Q9H741 205 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 HEXA-AS1Q9H8Q6 139 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 PLEKHJ1Q9NW61 149 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 SPRR3Q9UBC9 169 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 SLC7A11Q9UPY5 501 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 ZFHX4Q86UP3 3567 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 ZNF816-ZNF321PA0A0X1KG74 233 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 PLSCR5A0PG75 271 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 ZNF503-AS2A6NEH8 195 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 NFYAP23511 347 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-208ENST00000574755 CD34P28906 385 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 PMP22Q01453 160 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 DHODHQ02127 395 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 NKAPLQ5M9Q1 402 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 VAX1Q5SQQ9 334 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 PLCXD3Q63HM9 321 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 C6orf201Q7Z4U5 140 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 ARRDC1Q8N5I2 433 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 FDCSPQ8NFU4 85 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 OR5H2Q8NGV7 314 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 MARCH1Q8TCQ1 289 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 ST8SIA4Q92187 359 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 SPSB4Q96A44 273 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 Q96M66 194 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 TMPRSS13Q9BYE2 586 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 ZNF230Q9UIE0 474 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-208ENST00000574755 FAM186AA6NE01 2351 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 RGS11O94810 467 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 AKR1C4P17516 323 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 SNU13P55769 128 aaKnown RBP12.18□□□□□ -0.46
VPS33B-208ENST00000574755 IL13RA1P78552 427 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 PPP1R1AQ13522 171 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 CAMK2BQ13554 666 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 COLCA1Q6ZS62 124 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 MOB3CQ70IA8 216 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 LYG2Q86SG7 212 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 ZNF680Q8NEM1 530 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 TERB2Q8NHR7 220 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 ZDHHC11Q9H8X9 412 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 ZNF701Q9NV72 531 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-208ENST00000574755 KCNN3Q9UGI6 736 aa12.18□□□□□ -0.46
VPS33B-208ENST00000574755 CFAP47Q6ZTR5 3102 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 SLC22A20A6NK97 555 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 L7N2F9 121 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 M0R233 179 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 ZNHIT1O43257 154 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 SERPINA5P05154 406 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 VAMP1P23763 118 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 OR3A3P47888 321 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 OR3A2P47893 321 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 FUT6P51993 359 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 ATP1B3P54709 279 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 RAB1AP62820 205 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 RTL6Q6ICC9 239 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 HOGA1Q86XE5 327 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 CSNK2A3Q8NEV1 391 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 MAFIPQ8WZ33 124 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 FN3KRPQ9HA64 309 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 PRSS50Q9UI38 385 aa12.17□□□□□ -0.46
VPS33B-208ENST00000574755 URB1O60287 2271 aaKnown RBP12.17□□□□□ -0.46
VPS33B-208ENST00000574755 ARPC5O15511 151 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 NOS1APO75052 506 aaPredicted RBP12.16□□□□□ -0.46
VPS33B-208ENST00000574755 MPC2O95563 127 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 CXCL2P19875 107 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 C4BPBP20851 252 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 ZBTB25P24278 435 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 AGTR1P30556 359 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 TAF9Q16594 264 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 LIN54Q6MZP7 749 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 ADAD2Q8NCV1 583 aaKnown RBP12.16□□□□□ -0.46
VPS33B-208ENST00000574755 ASB13Q8WXK3 278 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 TECTBQ96PL2 329 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 PTPRBP23467 1997 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 PRRC2CQ9Y520 2896 aaKnown RBP12.16□□□□□ -0.46
VPS33B-208ENST00000574755 FXYD6-FXYD2A0A087WZ82 144 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 C9orf170A2RU37 121 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 COX5BP10606 129 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 ARR3P36575 388 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 TAS2R46P59540 309 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 GMFBP60983 142 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 SEC61A1P61619 476 aaKnown RBP12.16□□□□□ -0.46
VPS33B-208ENST00000574755 LY6G6FQ5SQ64 297 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 FAHD2BQ6P2I3 314 aaPredicted RBP12.16□□□□□ -0.46
VPS33B-208ENST00000574755 FAHD2AQ96GK7 314 aa12.16□□□□□ -0.46
VPS33B-208ENST00000574755 FXYD6Q9H0Q3 95 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms