RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 E5RGE8 158 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 ZNF205O95201 554 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 RNH1P13489 461 aaKnown RBP12.7□□□□□ -0.38
SMG6-215ENST00000574501 ZNF429Q86V71 674 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 SULF2Q8IWU5 870 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 LRRC18Q8N456 261 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 ZFP62Q8NB50 900 aaPredicted RBP12.7□□□□□ -0.38
SMG6-215ENST00000574501 OR51T1Q8NGJ9 327 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 KCNG3Q8TAE7 436 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 DAZLQ92904 295 aaKnown RBP12.7□□□□□ -0.38
SMG6-215ENST00000574501 GPER1Q99527 375 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 ATG101Q9BSB4 218 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 ZNF2Q9BSG1 426 aaPredicted RBP12.7□□□□□ -0.38
SMG6-215ENST00000574501 ZNF701Q9NV72 531 aaPredicted RBP12.7□□□□□ -0.38
SMG6-215ENST00000574501 PRODH2Q9UF12 536 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 NSG2Q9Y328 171 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 LIPGQ9Y5X9 500 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 ELOA3CA0A087WX78 387 aaPredicted RBP12.69□□□□□ -0.38
SMG6-215ENST00000574501 CLPSP04118 112 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 HCKP08631 526 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 MMP16P51512 607 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 SUCLG1P53597 346 aaKnown RBP12.69□□□□□ -0.38
SMG6-215ENST00000574501 RND3P61587 244 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 FUT7Q11130 342 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 GPM6BQ13491 265 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 HIST2H3PS2Q5TEC6 136 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 RNF208Q9H0X6 261 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 TLCD2A6NGC4 264 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 PLPP3O14495 311 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 TAS2R46P59540 309 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 CYB561D1Q8N8Q1 229 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 GPR119Q8TDV5 335 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 SCARF2Q96GP6 870 aaPredicted RBP12.69□□□□□ -0.38
SMG6-215ENST00000574501 HIST1H2BLQ99880 126 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 DUSP15Q9H1R2 295 aaPredicted RBP12.69□□□□□ -0.38
SMG6-215ENST00000574501 FBLN5Q9UBX5 448 aa12.69□□□□□ -0.38
SMG6-215ENST00000574501 KNL1Q8NG31 2342 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 REV3LO60673 3130 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 SMCO3A2RU48 225 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 H0YIG0 161 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 K7N7A8 449 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 GPR137BO60478 399 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 OR5H8P0DN80 308 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 MDKP21741 143 aaPredicted RBP12.68□□□□□ -0.38
SMG6-215ENST00000574501 ANOS1P23352 680 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 G0S2P27469 103 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 KLHL24Q6TFL4 600 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 DPPA2Q7Z7J5 298 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 OR5AS1Q8N127 324 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 MRPL43Q8N983 215 aaKnown RBP12.68□□□□□ -0.38
SMG6-215ENST00000574501 LFNGQ8NES3 379 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 SLAMF6Q96DU3 332 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 SNX22Q96L94 193 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 DEFB118Q96PH6 123 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 SLC25A31Q9H0C2 315 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 COL4A2P08572 1712 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 DXOO77932 396 aaKnown RBP12.68□□□□□ -0.38
SMG6-215ENST00000574501 IL33O95760 270 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 FBXO46Q6PJ61 603 aaPredicted RBP12.68□□□□□ -0.38
SMG6-215ENST00000574501 LYZL2Q7Z4W2 148 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 RNF133Q8WVZ7 376 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 FAM71F1Q96KD3 344 aaPredicted RBP12.68□□□□□ -0.38
SMG6-215ENST00000574501 ZNF700Q9H0M5 742 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 OR10A2Q9H208 303 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 SUSD2Q9UGT4 822 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 TP53TG5Q9Y2B4 290 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 KCNIP3Q9Y2W7 256 aa12.68□□□□□ -0.38
SMG6-215ENST00000574501 PHF3Q92576 2039 aaKnown RBP12.67□□□□□ -0.38
SMG6-215ENST00000574501 A0A087WZY1 265 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 A0A0J9YY10 115 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 A8MWP6 167 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 C17orf105B2RV13 164 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 HPNP05981 417 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 SRP19P09132 144 aaKnown RBP12.67□□□□□ -0.38
SMG6-215ENST00000574501 PGA4P0DJD7 388 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 PGA5P0DJD9 388 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 BLVRBP30043 206 aaPredicted RBP12.67□□□□□ -0.38
SMG6-215ENST00000574501 TMEM176BQ3YBM2 270 aaPredicted RBP12.67□□□□□ -0.38
SMG6-215ENST00000574501 TSPO2Q5TGU0 170 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 NUP54Q7Z3B4 507 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 C1QL2Q7Z5L3 287 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 ABHD12BQ7Z5M8 362 aaPredicted RBP12.67□□□□□ -0.38
SMG6-215ENST00000574501 OR52M1Q8NGK5 317 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 NPRL2Q8WTW4 380 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 GAL3ST4Q96RP7 486 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 UNKLQ9H9P5 680 aaKnown RBP12.67□□□□□ -0.38
SMG6-215ENST00000574501 MED29Q9NX70 200 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 A0A087WWC5 75 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 A0A1B0GWJ7 208 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 CRYM-AS1A6NIL9 109 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 DHRS7CA6NNS2 312 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 CLDN4O14493 209 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 CYTIPO60759 359 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 CCL5P13501 91 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 SPSB3Q6PJ21 355 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 ZNF664Q8N3J9 261 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 ARHGEF39Q8N4T4 335 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 NAXEQ8NCW5 288 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 OR2G3Q8NGZ4 309 aa12.67□□□□□ -0.38
SMG6-215ENST00000574501 M1APQ8TC57 530 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms