RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 AQP3Q92482 292 aa23.05■■□□□ 1.28
SCARF1-207ENST00000573867 CCL13Q99616 98 aa23.05■■□□□ 1.28
SCARF1-207ENST00000573867 ALG8Q9BVK2 526 aa23.05■■□□□ 1.28
SCARF1-207ENST00000573867 ISG20L2Q9H9L3 353 aaKnown RBP23.05■■□□□ 1.28
SCARF1-207ENST00000573867 SNTG1Q9NSN8 517 aa23.05■■□□□ 1.28
SCARF1-207ENST00000573867 ERVK-18Q9QC07 812 aa23.05■■□□□ 1.28
SCARF1-207ENST00000573867 KAAG1Q9UBP8 84 aa23.05■■□□□ 1.28
SCARF1-207ENST00000573867 NKX1-2Q9UD57 310 aaPredicted RBP23.05■■□□□ 1.28
SCARF1-207ENST00000573867 AUP1Q9Y679 476 aa23.05■■□□□ 1.28
SCARF1-207ENST00000573867 COL6A5A8TX70 2615 aa23.05■■□□□ 1.28
SCARF1-207ENST00000573867 EPHA1P21709 976 aa23.04■■□□□ 1.28
SCARF1-207ENST00000573867 HAGHLQ6PII5 290 aaPredicted RBP23.04■■□□□ 1.28
SCARF1-207ENST00000573867 C8orf4Q9NR00 106 aa23.04■■□□□ 1.28
SCARF1-207ENST00000573867 ERVK13-1Q9NX77 482 aa23.04■■□□□ 1.28
SCARF1-207ENST00000573867 KIR2DS1A0A191URI9 304 aa23.03■■□□□ 1.28
SCARF1-207ENST00000573867 PQLC2LA1A4F0 135 aa23.03■■□□□ 1.28
SCARF1-207ENST00000573867 DVL1O14640 695 aa23.03■■□□□ 1.28
SCARF1-207ENST00000573867 RAB40BQ12829 278 aa23.03■■□□□ 1.28
SCARF1-207ENST00000573867 KRTAP24-1Q3LI83 254 aa23.03■■□□□ 1.28
SCARF1-207ENST00000573867 FAM216BQ8N7L0 139 aa23.03■■□□□ 1.28
SCARF1-207ENST00000573867 NANPQ8TBE9 248 aa23.03■■□□□ 1.28
SCARF1-207ENST00000573867 NUDT16L1Q9BRJ7 211 aaKnown RBP23.03■■□□□ 1.28
SCARF1-207ENST00000573867 RPL36Q9Y3U8 105 aaKnown RBP23.03■■□□□ 1.28
SCARF1-207ENST00000573867 TMPRSS2O15393 492 aa23.02■■□□□ 1.28
SCARF1-207ENST00000573867 SYNGR1O43759 233 aa23.02■■□□□ 1.28
SCARF1-207ENST00000573867 FADS2O95864 444 aaKnown RBP23.02■■□□□ 1.28
SCARF1-207ENST00000573867 UBCP0CG48 685 aaKnown RBP23.02■■□□□ 1.28
SCARF1-207ENST00000573867 SELLP14151 372 aa23.02■■□□□ 1.28
SCARF1-207ENST00000573867 NPY4RP50391 375 aa23.02■■□□□ 1.28
SCARF1-207ENST00000573867 ACTA2P62736 377 aa23.02■■□□□ 1.28
SCARF1-207ENST00000573867 ACTG2P63267 376 aa23.02■■□□□ 1.28
SCARF1-207ENST00000573867 UBE2V2Q15819 145 aa23.02■■□□□ 1.28
SCARF1-207ENST00000573867 TEX29Q8N6K0 151 aa23.02■■□□□ 1.28
SCARF1-207ENST00000573867 OR10AC1Q8NH08 325 aa23.02■■□□□ 1.28
SCARF1-207ENST00000573867 MRI1Q9BV20 369 aa23.02■■□□□ 1.28
SCARF1-207ENST00000573867 ANKRD61A6NGH8 418 aa23.01■■□□□ 1.27
SCARF1-207ENST00000573867 E9PI62 339 aa23.01■■□□□ 1.27
SCARF1-207ENST00000573867 HTR1AP08908 422 aa23.01■■□□□ 1.27
SCARF1-207ENST00000573867 TTC23Q5W5X9 447 aa23.01■■□□□ 1.27
SCARF1-207ENST00000573867 DHRSXQ8N5I4 330 aa23.01■■□□□ 1.27
SCARF1-207ENST00000573867 C12orf43Q96C57 262 aaKnown RBP23.01■■□□□ 1.27
SCARF1-207ENST00000573867 ADAT3Q96EY9 351 aaPredicted RBP23.01■■□□□ 1.27
SCARF1-207ENST00000573867 ZNF488Q96MN9 340 aa23.01■■□□□ 1.27
SCARF1-207ENST00000573867 OCEL1Q9H607 264 aa23.01■■□□□ 1.27
SCARF1-207ENST00000573867 FGF20Q9NP95 211 aaPredicted RBP23.01■■□□□ 1.27
SCARF1-207ENST00000573867 ERICH4A6NGS2 130 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 OR4C45A6NMZ5 311 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 RNF212BA8MTL3 300 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 RGS9O75916 674 aaPredicted RBP23■■□□□ 1.27
SCARF1-207ENST00000573867 GNAO1P09471 354 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 LIMS3P0CW19 117 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 LIMS4P0CW20 117 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 BTNL3Q6UXE8 466 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 SYS1Q8N2H4 156 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 ANGPTL6Q8NI99 470 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 NPRL2Q8WTW4 380 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 C22orf15Q8WYQ4 148 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 ADI1Q9BV57 179 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 PLEKHA1Q9HB21 404 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 INPP5EQ9NRR6 644 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 DNAJB11Q9UBS4 358 aa23■■□□□ 1.27
SCARF1-207ENST00000573867 TCF21O43680 179 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 ISG15P05161 165 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 GLRA1P23415 457 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 HAAOP46952 286 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 TGM4P49221 684 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 CCR9P51686 369 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 ALKBH1Q13686 389 aaKnown RBP22.99■■□□□ 1.27
SCARF1-207ENST00000573867 ATPAF1Q5TC12 328 aaPredicted RBP22.99■■□□□ 1.27
SCARF1-207ENST00000573867 TMEM244Q5VVB8 128 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 CALHM1Q8IU99 346 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 PHC2Q8IXK0 858 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 CCDC54Q8NEL0 328 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 OR51A4Q8NGJ6 313 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 TRMT10AQ8TBZ6 339 aaKnown RBP22.99■■□□□ 1.27
SCARF1-207ENST00000573867 GAFA1Q96PS6 74 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 CHST5Q9GZS9 411 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 DCLRE1BQ9H816 532 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 NLKQ9UBE8 527 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 DOCK11Q5JSL3 2073 aa22.99■■□□□ 1.27
SCARF1-207ENST00000573867 IGKV1-27A0A075B6S5 117 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 J3QT63 122 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 ENSAO43768 121 aaKnown RBP22.98■■□□□ 1.27
SCARF1-207ENST00000573867 VENTXO95231 258 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 KLHL22Q53GT1 634 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 ARMCX4Q5H9R4 360 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 LAIR2Q6ISS4 152 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 ZNF788Q6ZQV5 615 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 BTN2A1Q7KYR7 527 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 ANGPTL5Q86XS5 388 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 ZNF573Q86YE8 665 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 POC1AQ8NBT0 407 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 ST8SIA4Q92187 359 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 UPRTQ96BW1 309 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 SLC6A7Q99884 636 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 JAM3Q9BX67 310 aa22.98■■□□□ 1.27
SCARF1-207ENST00000573867 IGKV1D-17A0A075B6S4 117 aa22.97■■□□□ 1.27
SCARF1-207ENST00000573867 PGA5P0DJD9 388 aa22.97■■□□□ 1.27
SCARF1-207ENST00000573867 IGHV4-38-2P0DP08 117 aa22.97■■□□□ 1.27
SCARF1-207ENST00000573867 CAPGP40121 348 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms