RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 FAM157AC9JC47 383 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 CTSSP25774 331 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 FCGR2CP31995 323 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 THBS4P35443 961 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 DHRS11Q6UWP2 260 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 ETV3LQ6ZN32 361 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 CADM4Q8NFZ8 388 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 SMIM3Q9BZL3 60 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 EML6Q6ZMW3 1958 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 PQLC2LA1A4F0 135 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 K7EPK0 472 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 MSTNO14793 375 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 ADH6P28332 368 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 PEA15Q15121 130 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 RSPO1Q2MKA7 263 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-206ENST00000573852 PHYHD1Q5SRE7 291 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 SLC16A14Q7RTX9 510 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 RABEPKQ7Z6M1 372 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 FAM71E2Q8N5Q1 922 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 WDSUB1Q8N9V3 476 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 USB1Q9BQ65 265 aaKnown RBP16.7■□□□□ 0.26
SCARF1-206ENST00000573852 V9GYS6 101 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 DEDDO75618 318 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 OR8U9P0C7N5 309 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 GABRR1P24046 479 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 ZNF574Q6ZN55 896 aaPredicted RBP16.69■□□□□ 0.26
SCARF1-206ENST00000573852 OR8U1Q8NH10 309 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 MRPL24Q96A35 216 aaKnown RBP16.69■□□□□ 0.26
SCARF1-206ENST00000573852 SULT4A1Q9BR01 284 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 PARP11Q9NR21 331 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 AMDHD2Q9Y303 409 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 LINC01387J3KSC0 135 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 DHRS3O75911 302 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 ZFAND5O76080 213 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 CPT2P23786 658 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 TMEM33P57088 247 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 Q6ZRG5 221 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 SULF2Q8IWU5 870 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 FNDC9Q8TBE3 224 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 S100A13Q99584 98 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 PARP12Q9H0J9 701 aaKnown RBP16.69■□□□□ 0.26
SCARF1-206ENST00000573852 PIGLQ9Y2B2 252 aa16.69■□□□□ 0.26
SCARF1-206ENST00000573852 ENDOGQ14249 297 aaKnown RBP16.68■□□□□ 0.26
SCARF1-206ENST00000573852 ZNF239Q16600 458 aaKnown RBP16.68■□□□□ 0.26
SCARF1-206ENST00000573852 FAM76BQ5HYJ3 339 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 GGNBP1Q5YKI7 109 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 CPEB2Q7Z5Q1 589 aaKnown RBP16.68■□□□□ 0.26
SCARF1-206ENST00000573852 HAS2Q92819 552 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 KIRREL1Q96J84 757 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 CHST5Q9GZS9 411 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 LIME1Q9H400 295 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 TUBD1Q9UJT1 453 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 LSM5Q9Y4Y9 91 aaKnown RBP16.68■□□□□ 0.26
SCARF1-206ENST00000573852 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 F2RL1P55085 397 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 LSM6P62312 80 aaKnown RBP16.68■□□□□ 0.26
SCARF1-206ENST00000573852 EIF3IQ13347 325 aaKnown RBP16.68■□□□□ 0.26
SCARF1-206ENST00000573852 AKIRIN2Q53H80 203 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 LCN10Q6JVE6 187 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 CLEC9AQ6UXN8 241 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 SGPP2Q8IWX5 399 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 SKA3Q8IX90 412 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 LRRC18Q8N456 261 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 AKR1E2Q96JD6 320 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 OR6C1Q96RD1 312 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 PRRX2Q99811 253 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 PLEKHJ1Q9NW61 149 aa16.68■□□□□ 0.26
SCARF1-206ENST00000573852 A0A0U1RQV5 110 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 CRYM-AS1A6NIL9 109 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 CTSDP07339 412 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-206ENST00000573852 DBHP09172 617 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 MSR1P21757 451 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 PRAMEF20Q5VT98 475 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 SFT2D1Q8WV19 159 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 PIGQQ9BRB3 760 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 CA14Q9ULX7 337 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 CEP192Q8TEP8 1941 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 LOC102725191A0A1B0GVB3 256 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 RRP8O43159 456 aaKnown RBP16.67■□□□□ 0.26
SCARF1-206ENST00000573852 TLX3O43711 291 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-206ENST00000573852 JTBO76095 146 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 GAPDHP04406 335 aaKnown RBP16.67■□□□□ 0.26
SCARF1-206ENST00000573852 DVL1P1P54792 670 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-206ENST00000573852 GJC3Q8NFK1 279 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 PP6455Q8WZ26 134 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 ERGIC1Q969X5 290 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 BSCL2Q96G97 398 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-206ENST00000573852 HDGFL3Q9Y3E1 203 aa16.67■□□□□ 0.26
SCARF1-206ENST00000573852 CA11O75493 328 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 AKR1C3P42330 323 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 RPUSD3Q6P087 351 aaKnown RBP16.66■□□□□ 0.26
SCARF1-206ENST00000573852 SECTM1Q8WVN6 248 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 RASL10BQ96S79 203 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 ZNF581Q9P0T4 197 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 CACFD1Q9UGQ2 172 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 CNTRLQ7Z7A1 2325 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 SCRG1O75711 98 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 ZNF205O95201 554 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 SCGB1D2O95969 90 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 CSNK1A1P48729 337 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms