RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 TUSC1Q2TAM9 212 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 CLVS2Q5SYC1 327 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 ZBTB37Q5TC79 503 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 STUMQ69YW2 141 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 HAGHLQ6PII5 290 aaPredicted RBP8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 DOK3Q7L591 496 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 ANGPTL5Q86XS5 388 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 ACBD7Q8N6N7 88 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 OR52I1Q8NGK6 324 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 OR10AC1Q8NH08 325 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 CNIH3Q8TBE1 160 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 TMEM158Q8WZ71 300 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 AQP3Q92482 292 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 PELI1Q96FA3 418 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 C4orf36Q96KX1 117 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 ZNF48Q96MX3 618 aaPredicted RBP8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 MRI1Q9BV20 369 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 ABCB9Q9NP78 766 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 ESM1Q9NQ30 184 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 MRPS18AQ9NVS2 196 aaKnown RBP8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 KAAG1Q9UBP8 84 aa8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 NKX1-2Q9UD57 310 aaPredicted RBP8.48□□□□□ -1.05
GTF3C1-213ENST00000571886 IGKV1-27A0A075B6S5 117 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 PQLC2LA1A4F0 135 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 SYT7O43581 403 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 NDUFA2O43678 99 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 IGHA1P01876 353 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 SFTPBP07988 381 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 GLRA1P23415 457 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 HAAOP46952 286 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 NPY4RP50391 375 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 ADARB1P78563 741 aaKnown RBP8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 IKZF1Q13422 519 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 GALEQ14376 348 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 KCNJ8Q15842 424 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 DGUOKQ16854 277 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 ATPAF1Q5TC12 328 aaPredicted RBP8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 ZNF691Q5VV52 312 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 FDX2Q6P4F2 183 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 BTNL3Q6UXE8 466 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 BTN2A1Q7KYR7 527 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 RNF144BQ7Z419 303 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 CALHM1Q8IU99 346 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 ZNF555Q8NEP9 628 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 OR51A4Q8NGJ6 313 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 SPATA3Q8NHX4 192 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 ANGPTL6Q8NI99 470 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 TRMT10AQ8TBZ6 339 aaKnown RBP8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 NPRL2Q8WTW4 380 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 ST8SIA4Q92187 359 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 UPRTQ96BW1 309 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 ADAT3Q96EY9 351 aaPredicted RBP8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 GAFA1Q96PS6 74 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 ALG8Q9BVK2 526 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 C19orf24Q9BVV8 132 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 ERVK13-1Q9NX77 482 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 NUP50Q9UKX7 468 aa8.47□□□□□ -1.05
GTF3C1-213ENST00000571886 IGKV1D-17A0A075B6S4 117 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 IGKV1-9A0A0C4DH69 117 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 A0A1B0GVI7 797 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 LOC107986453A0A1B0GWG9 222 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 FAM230AA0A1W2PPH8 454 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 OR5B21A6NL26 309 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 OR4C45A6NMZ5 311 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 F8VVB4 439 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 F8VWA3 439 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 MPZL2O60487 215 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 LIMS3P0CW19 117 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 LIMS4P0CW20 117 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 PSG2P11465 335 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 MMP9P14780 707 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 CEBPDP49716 269 aaPredicted RBP8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 DLX1P56177 255 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 ACTC1P68032 377 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 ACTA1P68133 377 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 PRB3Q04118 309 aaPredicted RBP8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 ALKBH1Q13686 389 aaKnown RBP8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 ARMCX4Q5H9R4 360 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 OGFRL1Q5TC84 451 aaPredicted RBP8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 LAIR2Q6ISS4 152 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 ACP7Q6ZNF0 438 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 ZNF788Q6ZQV5 615 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 FAM220AQ7Z4H9 259 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 TEX29Q8N6K0 151 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 CD177Q8N6Q3 437 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 ZDHHC22Q8N966 263 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 ZNF671Q8TAW3 534 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 CYGBQ8WWM9 190 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 ITFG2Q969R8 447 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 RDH12Q96NR8 316 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 TBX15Q96SF7 602 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 ELL3Q9HB65 397 aaPredicted RBP8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 TRIM36Q9NQ86 728 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 NLKQ9UBE8 527 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 DNAJB11Q9UBS4 358 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 ZNF222Q9UK12 451 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 MAB21L2Q9Y586 359 aa8.46□□□□□ -1.06
GTF3C1-213ENST00000571886 STAB1Q9NY15 2570 aa8.45□□□□□ -1.06
GTF3C1-213ENST00000571886 TRAV40A0A0B4J280 105 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms