RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 SAC3D1A6NKF1 404 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 SLC22A31A6NKX4 558 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 OR2AT4A6NND4 320 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 ZNF670-ZNF695F2Z2N8 137 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 ZNF254O75437 659 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 SRSF10O75494 262 aaKnown RBP11.31□□□□□ -0.6
RAB40B-204ENST00000571554 IGLV3-1P01715 115 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 BPIFB3P59826 476 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 IL13RA1P78552 427 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 EFNB1P98172 346 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 SRSF4Q08170 494 aaKnown RBP11.31□□□□□ -0.6
RAB40B-204ENST00000571554 BCL2L15Q5TBC7 163 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 NXNL2Q5VZ03 156 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 SHISA2Q6UWI4 295 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 KIR3DL3Q8N743 410 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 ZNRF1Q8ND25 227 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 TMEM185AQ8NFB2 350 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 AQP3Q92482 292 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 GABARAPL1Q9H0R8 117 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 NOX4Q9NPH5 578 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 MRM2Q9UI43 246 aaKnown RBP11.31□□□□□ -0.6
RAB40B-204ENST00000571554 ENPP5Q9UJA9 477 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 OR52A1Q9UKL2 312 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 OAZ3Q9UMX2 235 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 KPTNQ9Y664 436 aa11.31□□□□□ -0.6
RAB40B-204ENST00000571554 IGKV1D-17A0A075B6S4 117 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 A0A1B0GVI7 797 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 A0A1W2PQ09 198 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 RNASEK-C17orf49H0YIS7 233 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 SIGLEC5O15389 551 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 SYNGR1O43759 233 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 DHRS3O75911 302 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 NRASP01111 189 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 CRYBA1P05813 215 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 ACAA1P09110 424 aaPredicted RBP11.3□□□□□ -0.6
RAB40B-204ENST00000571554 PSG2P11465 335 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 CEBPDP49716 269 aaPredicted RBP11.3□□□□□ -0.6
RAB40B-204ENST00000571554 RASSF2P50749 326 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 RAG2P55895 527 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 RELBQ01201 579 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 ZNF684Q5T5D7 378 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 ATPAF1Q5TC12 328 aaPredicted RBP11.3□□□□□ -0.6
RAB40B-204ENST00000571554 Q8N7P7 452 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 YIPF7Q8N8F6 280 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 CLN6Q9NWW5 311 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 C1RLQ9NZP8 487 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 R4GMQ9 66 aa11.3□□□□□ -0.6
RAB40B-204ENST00000571554 OR5B21A6NL26 309 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 CIB2O75838 187 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 HAAOP46952 286 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 CAPZA1P52907 286 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 ASRGL1Q7L266 308 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 GID4Q8IVV7 300 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 ELMOD2Q8IZ81 293 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 CMTM4Q8IZR5 234 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 FAM185AQ8N0U4 392 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 OR5A2Q8NGI9 324 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 TRMT10AQ8TBZ6 339 aaKnown RBP11.29□□□□□ -0.6
RAB40B-204ENST00000571554 NPRL2Q8WTW4 380 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 SSMEM1Q8WWF3 244 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 PYDC1Q8WXC3 89 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 MED30Q96HR3 178 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 DNTTIP1Q9H147 329 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 ZNF222Q9UK12 451 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 FAM96BQ9Y3D0 163 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 MAB21L2Q9Y586 359 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 PKD1L1Q8TDX9 2849 aa11.29□□□□□ -0.6
RAB40B-204ENST00000571554 A0A1B0GTI1 187 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 A0A1W2PQL4 384 aaPredicted RBP11.28□□□□□ -0.6
RAB40B-204ENST00000571554 RFPL4AA6NLU0 287 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 RFPL4AL1F8VTS6 287 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 GPR37O15354 613 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 GPR137BO60478 399 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 MTRF1O75570 445 aaKnown RBP11.28□□□□□ -0.6
RAB40B-204ENST00000571554 ATP5HO75947 161 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 KRT8P05787 483 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 FCGR1AP12314 374 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 ATP6V1B1P15313 513 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 C11orf91Q3C1V1 193 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 KRT74Q7RTS7 529 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 OR10H4Q8NGA5 316 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 OR14K1Q8NGZ2 314 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 C8orf46Q8TAG6 207 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 ZNF671Q8TAW3 534 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 TBC1D15Q8TC07 691 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 DUS3LQ96G46 650 aaKnown RBP11.28□□□□□ -0.6
RAB40B-204ENST00000571554 MOB1AQ9H8S9 216 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 SNX5Q9Y5X3 404 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 V9GYS6 101 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 MGAM2Q2M2H8 2515 aa11.28□□□□□ -0.6
RAB40B-204ENST00000571554 J3QT63 122 aa11.27□□□□□ -0.61
RAB40B-204ENST00000571554 NPFFO15130 113 aa11.27□□□□□ -0.61
RAB40B-204ENST00000571554 INMTO95050 263 aa11.27□□□□□ -0.61
RAB40B-204ENST00000571554 KNG1P01042 644 aa11.27□□□□□ -0.61
RAB40B-204ENST00000571554 IER3P46695 156 aa11.27□□□□□ -0.61
RAB40B-204ENST00000571554 ACTR3P61158 418 aa11.27□□□□□ -0.61
RAB40B-204ENST00000571554 EGR3Q06889 387 aa11.27□□□□□ -0.61
RAB40B-204ENST00000571554 CLVS2Q5SYC1 327 aa11.27□□□□□ -0.61
RAB40B-204ENST00000571554 ZBTB37Q5TC79 503 aa11.27□□□□□ -0.61
RAB40B-204ENST00000571554 ACP7Q6ZNF0 438 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms