RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 H3BQ15 152 aa13.58□□□□□ -0.24
SMG6-207ENST00000570756 RPL36A-HNRNPH2H7BZ11 118 aa13.58□□□□□ -0.24
SMG6-207ENST00000570756 MBPP02686 304 aaPredicted RBP13.58□□□□□ -0.24
SMG6-207ENST00000570756 ACY1Q03154 408 aa13.58□□□□□ -0.24
SMG6-207ENST00000570756 PPA1Q15181 289 aa13.58□□□□□ -0.24
SMG6-207ENST00000570756 ELOBQ15370 118 aa13.58□□□□□ -0.24
SMG6-207ENST00000570756 UBE2V2Q15819 145 aa13.58□□□□□ -0.24
SMG6-207ENST00000570756 LBHQ53QV2 105 aaPredicted RBP13.58□□□□□ -0.24
SMG6-207ENST00000570756 RNF144BQ7Z419 303 aa13.58□□□□□ -0.24
SMG6-207ENST00000570756 ABHD12BQ7Z5M8 362 aaPredicted RBP13.58□□□□□ -0.24
SMG6-207ENST00000570756 DAZLQ92904 295 aaKnown RBP13.58□□□□□ -0.24
SMG6-207ENST00000570756 BMFQ96LC9 184 aa13.58□□□□□ -0.24
SMG6-207ENST00000570756 SH3BGRL3Q9H299 93 aa13.58□□□□□ -0.24
SMG6-207ENST00000570756 KIR2DS5A0A0G2JLQ3 304 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 A0A0G2JNG1 304 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 KIR2DS3K7RE56 304 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 HIST1H2BKO60814 126 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 HIST1H2BJP06899 126 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 HIST1H2BOP23527 126 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 HIST1H2BBP33778 126 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 PPP1CCP36873 323 aaKnown RBP13.57□□□□□ -0.24
SMG6-207ENST00000570756 HIST1H2BDP58876 126 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 UBE2KP61086 200 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 DCAF7P61962 342 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 HIST1H2BCP62807 126 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 ZP4Q12836 540 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 KIR2DS5Q14953 304 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 HIST2H2BEQ16778 126 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.57□□□□□ -0.24
SMG6-207ENST00000570756 CLEC9AQ6UXN8 241 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 C12orf76Q8N812 135 aaPredicted RBP13.57□□□□□ -0.24
SMG6-207ENST00000570756 HSD17B11Q8NBQ5 300 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 OR8G5Q8NG78 346 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 SLC37A2Q8TED4 501 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 C11orf40Q8WZ69 217 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 HIST1H2BHQ93079 126 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 RAB39BQ96DA2 213 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 MEGF10Q96KG7 1140 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 HIST1H2BNQ99877 126 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 HIST1H2BMQ99879 126 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 ZNF2Q9BSG1 426 aaPredicted RBP13.57□□□□□ -0.24
SMG6-207ENST00000570756 SDHAF3Q9NRP4 125 aa13.57□□□□□ -0.24
SMG6-207ENST00000570756 BTBD17A6NE02 478 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 RBFOX3A6NFN3 312 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 NPIPB13A6NJU9 1138 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 NPIPB4C9JG80 1138 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 K7N7A8 449 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 RRP8O43159 456 aaKnown RBP13.56□□□□□ -0.24
SMG6-207ENST00000570756 RAMP1O60894 148 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 WISP1O95388 367 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 BLVRBP30043 206 aaPredicted RBP13.56□□□□□ -0.24
SMG6-207ENST00000570756 FIP1L1Q6UN15 594 aaKnown RBP13.56□□□□□ -0.24
SMG6-207ENST00000570756 TMEM182Q6ZP80 229 aaPredicted RBP13.56□□□□□ -0.24
SMG6-207ENST00000570756 STT3BQ8TCJ2 826 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 Q8WTZ3 238 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 ADIPOR1Q96A54 375 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 NTNG2Q96CW9 530 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 BSCL2Q96G97 398 aaPredicted RBP13.56□□□□□ -0.24
SMG6-207ENST00000570756 ZNF701Q9NV72 531 aaPredicted RBP13.56□□□□□ -0.24
SMG6-207ENST00000570756 PADI1Q9ULC6 663 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 IGKV1D-43A0A0B4J1Z2 117 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 C17orf51A8MQB3 221 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 C5orf67F2Z3F1 127 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 HPNP05981 417 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 HEXBP07686 556 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 GABRA4P48169 554 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 IL13RA2Q14627 380 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 SSX2Q16385 188 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 TANGO2Q6ICL3 276 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 PLXDC2Q6UX71 529 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 YAF2Q8IY57 180 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 HIST3H2BBQ8N257 126 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 METTL27Q8N6F8 245 aaPredicted RBP13.56□□□□□ -0.24
SMG6-207ENST00000570756 APCDD1LQ8NCL9 501 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 HPSE2Q8WWQ2 592 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 RARRES2Q99969 163 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 ATG2BQ96BY7 2078 aa13.56□□□□□ -0.24
SMG6-207ENST00000570756 A0A087X0M5 115 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 NSG1A0A0A6YYJ2 146 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 A0A1B0GV50 99 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 A0A1B0GX30 115 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 OR5H15A6NDH6 313 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 OR5H1A6NKK0 313 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 FTCDNL1E5RQL4 147 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 MS4A18H0YCH9 400 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 ADAM10O14672 748 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 CA11O75493 328 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 PTBP3O95758 552 aaKnown RBP13.55□□□□□ -0.24
SMG6-207ENST00000570756 HNRNPA2B1P22626 353 aaKnown RBP13.55□□□□□ -0.24
SMG6-207ENST00000570756 APOBEC1P41238 236 aaKnown RBP13.55□□□□□ -0.24
SMG6-207ENST00000570756 GAMTQ14353 236 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 MS4A18Q3C1V0 323 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 HLA-DQA1Q5Y7H0 255 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 SPNS3Q6ZMD2 512 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 SHDQ96IW2 340 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 PECRQ9BY49 303 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 ZNF726A6NNF4 738 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 ZNF727A8MUV8 499 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 GIMD1P0DJR0 217 aa13.55□□□□□ -0.24
SMG6-207ENST00000570756 POU3F1Q03052 451 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms