RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 LYNP07948 512 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 CD28P10747 220 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 CLUP10909 449 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 ATP6V1B1P15313 513 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 MAP2K3P46734 347 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 GPM6AP51674 278 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 BMXP51813 675 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 CAPZA1P52907 286 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 CNN3Q15417 329 aaKnown RBP12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 SMIM21Q3B7S5 101 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 CEACAM21Q3KPI0 293 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 SPATS1Q496A3 300 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 OR5A2Q8NGI9 324 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 RPS4Y2Q8TD47 263 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 WIPF2Q8TF74 440 aaPredicted RBP12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 OR51I2Q9H344 312 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 ELL3Q9HB65 397 aaPredicted RBP12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 ABCB10Q9NRK6 738 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 C19orf12Q9NSK7 152 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 TBL2Q9Y4P3 447 aaKnown RBP12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 H3BUI4 141 aa12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 ARPC2O15144 300 aa12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 MTRF1O75570 445 aaKnown RBP12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 RHBDL1O75783 438 aa12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 CD33P20138 364 aa12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 PSMA6P60900 246 aaKnown RBP12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 FOXB2Q5VYV0 432 aa12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 LYG1Q8N1E2 194 aa12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 C11orf42Q8N5U0 333 aa12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 OR4Q3Q8NH05 313 aa12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 OTOSQ8NHW6 89 aa12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 FAM81AQ8TBF8 368 aa12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 MALSU1Q96EH3 234 aa12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 CITED2Q99967 270 aaPredicted RBP12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 DGCR6LQ9BY27 220 aa12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 WNT10AQ9GZT5 417 aa12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 FGF23Q9GZV9 251 aaPredicted RBP12.74□□□□□ -0.37
HERPUD1-215ENST00000568676 MEGF11A6BM72 1044 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 ACOD1A6NK06 481 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 ZNF732B4DXR9 585 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 RBP4P02753 201 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 TFF1P04155 84 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 DYNLT3P51808 116 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 ZBTB37Q5TC79 503 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 LCN1P1Q5VSP4 162 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 TMEM200BQ69YZ2 307 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 PGAM4Q8N0Y7 254 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 AQP11Q8NBQ7 271 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 AQP3Q92482 292 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 AMELYQ99218 206 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 MYLK2Q9H1R3 596 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 YY1AP1Q9H869 796 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 NOTCH3Q9UM47 2321 aa12.73□□□□□ -0.37
HERPUD1-215ENST00000568676 A0A0U1RQV5 110 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 A6NDX4 124 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 ADARB2-AS1A8MUL3 147 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 DUS4LO95620 317 aaKnown RBP12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 MAGEA2P43356 314 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 GK3PQ14409 553 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 CD300LDQ6UXZ3 194 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 ACP7Q6ZNF0 438 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 POC1AQ8NBT0 407 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 OR8B12Q8NGG6 310 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 OR13D1Q8NGV5 346 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 TEX47Q8TBZ9 253 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 THEM6Q8WUY1 208 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 LYZL4Q96KX0 146 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 C1orf21Q9H246 121 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 ARMC1Q9NVT9 282 aa12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.72□□□□□ -0.37
HERPUD1-215ENST00000568676 RFPL4AA6NLU0 287 aa12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 RFPL4AL1F8VTS6 287 aa12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 PRODHO43272 600 aa12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 NOS1APO75052 506 aaPredicted RBP12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 SOX14O95416 240 aa12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 COX7A1P24310 79 aa12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 PRDX2P32119 198 aa12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 HABP2Q14520 560 aaPredicted RBP12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 MICAQ29983 383 aa12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 ARSJQ5FYB0 599 aaPredicted RBP12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 HAGHLQ6PII5 290 aaPredicted RBP12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 OR2T27Q8NH04 317 aa12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 NDE1Q9NXR1 346 aa12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 POLDIP2Q9Y2S7 368 aa12.71□□□□□ -0.37
HERPUD1-215ENST00000568676 FAM183AA6NL82 134 aa12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 C17orf98A8MV24 154 aa12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 DYNC1I1O14576 645 aa12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 GSC2O15499 205 aa12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 MPIG6BO95866 241 aa12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 AZGP1P25311 298 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 PAX6P26367 422 aa12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 VDAC2P45880 294 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 SLC35A2P78381 396 aa12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 CD83Q01151 205 aa12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 RIPPLY1Q0D2K3 151 aa12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 CEP78Q5JTW2 689 aa12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 ZNF626Q68DY1 528 aa12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 LCN8Q6JVE9 175 aa12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 DEGS2Q6QHC5 323 aa12.7□□□□□ -0.38
HERPUD1-215ENST00000568676 LHFPL4Q7Z7J7 247 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms