RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 OR3A4PP47883 348 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 SRP9P49458 86 aaKnown RBP12.62□□□□□ -0.39
COMMD4-221ENST00000567935 RBP2P50120 134 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 FUT6P51993 359 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 P2RY6Q15077 328 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 RNASE12Q5GAN4 147 aaKnown RBP12.62□□□□□ -0.39
COMMD4-221ENST00000567935 C1orf185Q5T7R7 199 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 ZNF585AQ6P3V2 769 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 MRPL21Q7Z2W9 205 aaKnown RBP12.62□□□□□ -0.39
COMMD4-221ENST00000567935 BIVMQ86UB2 503 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 FJX1Q86VR8 437 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 GCNT2Q8N0V5 402 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 GABRG1Q8N1C3 465 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 CNEP1R1Q8N9A8 125 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 OR56B1Q8NGI3 324 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 TNFAIP8L1Q8WVP5 186 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 AQP3Q92482 292 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 NOX3Q9HBY0 568 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 HRASLSQ9HDD0 168 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 KLK11Q9UBX7 282 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 PROCRQ9UNN8 238 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 KLF2Q9Y5W3 355 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-221ENST00000567935 HMX3A6NHT5 357 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 CDC14BO60729 498 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 CST4P01036 141 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 TCRBP04435 133 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 RCVRNP35243 200 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 TIMP3P35625 211 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 ATP1B3P54709 279 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 MTCP1P56278 107 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 TAS2R19P59542 299 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 GABRA6Q16445 453 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 TATDN3Q17R31 274 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 PNLIPRP3Q17RR3 467 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 HIKESHIQ53FT3 197 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 ZNF324BQ6AW86 544 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-221ENST00000567935 RTL6Q6ICC9 239 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 UNQ6126/PRO20091Q6UXV3 157 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 BEND4Q6ZU67 534 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 BTN2A1Q7KYR7 527 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 MDP1Q86V88 176 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 TMEM229BQ8NBD8 167 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 SLC30A7Q8NEW0 376 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 OR10R2Q8NGX6 335 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 OR56B4Q8NH76 319 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 UBASH3BQ8TF42 649 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 UPRTQ96BW1 309 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 BORCS8Q96FH0 119 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 ZNF75AQ96N20 296 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 LPAR5Q9H1C0 372 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 KCNK15Q9H427 330 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.61□□□□□ -0.39
COMMD4-221ENST00000567935 GPR173Q9NS66 373 aa12.61□□□□□ -0.39
COMMD4-221ENST00000567935 ZNF503-AS2A6NEH8 195 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 MPIG6BO95866 241 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 TPOP07202 933 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 AKAIN1P0CW23 69 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 CCNOP22674 350 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 TUBG1P23258 451 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 CPT2P23786 658 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 GIFP27352 417 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 ZP1P60852 638 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 RPS27AP62979 156 aaKnown RBP12.6□□□□□ -0.39
COMMD4-221ENST00000567935 TNK1Q13470 666 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 PCGF3Q3KNV8 242 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 ZNF260Q3ZCT1 412 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 OR10K2Q6IF99 312 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 ASCL4Q6XD76 172 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 ZNF584Q8IVC4 421 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 FAM89BQ8N5H3 189 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 FAM169BQ8N8A8 192 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 ZSCAN4Q8NAM6 433 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-221ENST00000567935 PXT1Q8NFP0 134 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 FAM57AQ8TBR7 257 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 SEH1LQ96EE3 360 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 MRPS24Q96EL2 167 aaKnown RBP12.6□□□□□ -0.39
COMMD4-221ENST00000567935 SPACA5Q96QH8 159 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 TM2D1Q9BX74 207 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 METTL9Q9H1A3 318 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 TUBG2Q9NRH3 451 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 IL36GQ9NZH8 169 aa12.6□□□□□ -0.39
COMMD4-221ENST00000567935 EIF3KQ9UBQ5 218 aaKnown RBP12.6□□□□□ -0.39
COMMD4-221ENST00000567935 PRAF2O60831 178 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 CA11O75493 328 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 CRTAPO75718 401 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-221ENST00000567935 TNFSF13O75888 250 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 IL2RAP01589 272 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 CBR1P16152 277 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 ZNF14P17017 642 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-221ENST00000567935 TBPP20226 339 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 PSMB1P20618 241 aaKnown RBP12.59□□□□□ -0.39
COMMD4-221ENST00000567935 CBX5P45973 191 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 GK2Q14410 553 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-221ENST00000567935 PPA1Q15181 289 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 PLCXD3Q63HM9 321 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 Q6ZTK2 550 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 C1orf174Q8IYL3 243 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 ACBD4Q8NC06 268 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 CHST4Q8NCG5 386 aa12.59□□□□□ -0.39
COMMD4-221ENST00000567935 ITLN2Q8WWU7 325 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms