RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 INTS14Q96SY0 518 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 TBX5Q99593 518 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 NKX3-1Q99801 234 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-216ENST00000567071 CCDC90BQ9GZT6 254 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 WDR76Q9H967 626 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 EMC7Q9NPA0 242 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 PLCXD1Q9NUJ7 323 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 MRPL22Q9NWU5 206 aaKnown RBP7.92□□□□□ -1.14
CAPN3-216ENST00000567071 POLR1DQ9Y2S0 133 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 MAB21L2Q9Y586 359 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 COMMD3-BMI1R4GMX3 469 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 H3BUX3 64 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 RGS10O43665 173 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 FADS2O95864 444 aaKnown RBP7.91□□□□□ -1.14
CAPN3-216ENST00000567071 SCG5P05408 212 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 CDK1P06493 297 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 SPARCP09486 303 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 SMIM18P0DKX4 95 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 PIPP12273 146 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-216ENST00000567071 ATP6V1B1P15313 513 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 LAP3P28838 519 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 C21orf33P30042 268 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-216ENST00000567071 ZNF133P52736 654 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-216ENST00000567071 HCCSP53701 268 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 CSNK2BP67870 215 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 HSF2Q03933 536 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 RAB40BQ12829 278 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 TMED1Q13445 227 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 SGCAQ16586 387 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 ZNF404Q494X3 552 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 DCDC5Q6ZRR9 648 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 LHFPL2Q6ZUX7 228 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 SATL1Q86VE3 508 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 LINC00346Q8IVM7 164 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 SKA3Q8IX90 412 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 SLC35F2Q8IXU6 374 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 SLC22A24Q8N4F4 322 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 SLC25A40Q8TBP6 338 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 MYDGFQ969H8 173 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 YTHDF1Q9BYJ9 559 aaKnown RBP7.91□□□□□ -1.14
CAPN3-216ENST00000567071 OR2J1Q9GZK6 312 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 SIRPDQ9H106 197 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 DUSP21Q9H596 190 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 TMEM38BQ9NVV0 291 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 FKBP14Q9NWM8 211 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 CNOT2Q9NZN8 540 aaKnown RBP7.91□□□□□ -1.14
CAPN3-216ENST00000567071 KLHDC2Q9Y2U9 406 aa7.91□□□□□ -1.14
CAPN3-216ENST00000567071 LSM4Q9Y4Z0 139 aaKnown RBP7.91□□□□□ -1.14
CAPN3-216ENST00000567071 HUWE1Q7Z6Z7 4374 aaKnown RBP7.91□□□□□ -1.14
CAPN3-216ENST00000567071 A0A1B0GVI7 797 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 IRGMA1A4Y4 181 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 MAGEA13PA6NCF6 341 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 C12orf71A8MTZ7 269 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 SLC25A17O43808 307 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 ZNF823P16415 610 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 MAP2K4P45985 399 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 ENTPD1P49961 510 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 BLVRAP53004 296 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 ARF6P62330 175 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 POU4F2Q12837 409 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 LY6EQ16553 131 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 ZNF773Q6PK81 442 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 SLC16A9Q7RTY1 509 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 DPY19L4Q7Z388 723 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 TIGD4Q8IY51 512 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 LRRC18Q8N456 261 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 TSPAN14Q8NG11 270 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 NABP1Q96AH0 204 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 TMEM80Q96HE8 168 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 OR2V2Q96R30 315 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 MEGF9Q9H1U4 602 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 FGF20Q9NP95 211 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-216ENST00000567071 CCNB1IP1Q9NPC3 277 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 POLE4Q9NR33 117 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 INPP5EQ9NRR6 644 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 MRPS18AQ9NVS2 196 aaKnown RBP7.9□□□□□ -1.14
CAPN3-216ENST00000567071 HAO2Q9NYQ3 351 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 KCNG2Q9UJ96 466 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 DIMT1Q9UNQ2 313 aaKnown RBP7.9□□□□□ -1.14
CAPN3-216ENST00000567071 COPS3Q9UNS2 423 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 EXOGQ9Y2C4 368 aaKnown RBP7.9□□□□□ -1.14
CAPN3-216ENST00000567071 SNX5Q9Y5X3 404 aa7.9□□□□□ -1.14
CAPN3-216ENST00000567071 DAPL1A0PJW8 107 aa7.89□□□□□ -1.15
CAPN3-216ENST00000567071 J3QRE1 110 aa7.89□□□□□ -1.15
CAPN3-216ENST00000567071 ZNF593O00488 134 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-216ENST00000567071 FSTL3O95633 263 aa7.89□□□□□ -1.15
CAPN3-216ENST00000567071 CYB5R3P00387 301 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-216ENST00000567071 LHBP01229 141 aa7.89□□□□□ -1.15
CAPN3-216ENST00000567071 IGHA1P01876 353 aa7.89□□□□□ -1.15
CAPN3-216ENST00000567071 ALDOBP05062 364 aa7.89□□□□□ -1.15
CAPN3-216ENST00000567071 IRF2P14316 349 aa7.89□□□□□ -1.15
CAPN3-216ENST00000567071 MYL12AP19105 171 aa7.89□□□□□ -1.15
CAPN3-216ENST00000567071 MSR1P21757 451 aa7.89□□□□□ -1.15
CAPN3-216ENST00000567071 GUCA1AP43080 201 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-216ENST00000567071 ETV1P50549 477 aa7.89□□□□□ -1.15
CAPN3-216ENST00000567071 PPP1CBP62140 327 aa7.89□□□□□ -1.15
CAPN3-216ENST00000567071 ACTC1P68032 377 aa7.89□□□□□ -1.15
CAPN3-216ENST00000567071 ACTA1P68133 377 aa7.89□□□□□ -1.15
CAPN3-216ENST00000567071 MRPS34P82930 218 aaKnown RBP7.89□□□□□ -1.15
CAPN3-216ENST00000567071 LINC01559Q495D7 138 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms