RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 OR13C3Q8NGS6 347 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 OR13G1Q8NGZ3 307 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 GTF3AQ92664 365 aaKnown RBP11.38□□□□□ -0.59
CLK3-218ENST00000566926 RAB1CQ92928 201 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 KCTD12Q96CX2 325 aaKnown RBP11.38□□□□□ -0.59
CLK3-218ENST00000566926 MRI1Q9BV20 369 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 TCF7L1Q9HCS4 588 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 IL19Q9UHD0 177 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 ABCA2Q9BZC7 2435 aa11.38□□□□□ -0.59
CLK3-218ENST00000566926 A0A075B6Q4 140 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 IQCF6A8MYZ5 107 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 IFNL4K9M1U5 179 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 TGFAP01135 160 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 ZNF16P17020 682 aaPredicted RBP11.37□□□□□ -0.59
CLK3-218ENST00000566926 SRMP19623 302 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 RPS19P39019 145 aaKnown RBP11.37□□□□□ -0.59
CLK3-218ENST00000566926 PPP3R1P63098 170 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 HLXQ14774 488 aaPredicted RBP11.37□□□□□ -0.59
CLK3-218ENST00000566926 OR2T2Q6IF00 324 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 PGAP1Q75T13 922 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 MRPL21Q7Z2W9 205 aaKnown RBP11.37□□□□□ -0.59
CLK3-218ENST00000566926 COMMD2Q86X83 199 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 SERPINA12Q8IW75 414 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 OR5AS1Q8N127 324 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 PARP16Q8N5Y8 322 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 LINC01356Q8N9X3 169 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 PLPP7Q8NBV4 271 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 OR13C5Q8NGS8 318 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 OR51E1Q8TCB6 317 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 ACOT12Q8WYK0 555 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 CCL17Q92583 94 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 MSI2Q96DH6 328 aaKnown RBP11.37□□□□□ -0.59
CLK3-218ENST00000566926 SLIRPQ9GZT3 109 aaKnown RBP11.37□□□□□ -0.59
CLK3-218ENST00000566926 NXF2Q9GZY0 626 aaKnown RBP11.37□□□□□ -0.59
CLK3-218ENST00000566926 PLEKHA1Q9HB21 404 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 NOX4Q9NPH5 578 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 BRD7Q9NPI1 651 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 GPR84Q9NQS5 396 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 TMEM100Q9NV29 134 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 LPAR3Q9UBY5 353 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 CDC42EP3Q9UKI2 254 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 NOP16Q9Y3C1 178 aaKnown RBP11.37□□□□□ -0.59
CLK3-218ENST00000566926 JMJD1CQ15652 2540 aa11.37□□□□□ -0.59
CLK3-218ENST00000566926 P2RY10O00398 339 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 DHRS3O75911 302 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 RAB3BP20337 219 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 SRP9P49458 86 aaKnown RBP11.36□□□□□ -0.59
CLK3-218ENST00000566926 LSAMPQ13449 338 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 GK2Q14410 553 aaPredicted RBP11.36□□□□□ -0.59
CLK3-218ENST00000566926 CHRFAM7AQ494W8 412 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 ZBTB37Q5TC79 503 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 Q6ZR03 302 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 NAA40Q86UY6 237 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 RDH10Q8IZV5 341 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 NKAIN3Q8N8D7 197 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 OR5D14Q8NGL3 314 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 CLDND2Q8NHS1 167 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 MCFD2Q8NI22 146 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 RAB39BQ96DA2 213 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 C1orf159Q96HA4 380 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 SLC30A2Q9BRI3 323 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 SLC22A4Q9H015 551 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 RNF167Q9H6Y7 350 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 NEK6Q9HC98 313 aa11.36□□□□□ -0.59
CLK3-218ENST00000566926 A0A1B0GTI1 187 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 NOTOA8MTQ0 251 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 B4DSR2 109 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 TBX1O43435 398 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 ALX3O95076 343 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 SLC2A1P11166 492 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 ZNF20P17024 532 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 HNF1AP20823 631 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 CFPP27918 469 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 S100A5P33763 92 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 SOX2P48431 317 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 CAPZA1P52907 286 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 SCAND1P57086 179 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 HNRNPA0Q13151 305 aaKnown RBP11.35□□□□□ -0.59
CLK3-218ENST00000566926 INSL4Q14641 139 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 ODF4Q2M2E3 257 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 MZT2AQ6P582 158 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 CDH26Q8IXH8 852 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 FTMTQ8N4E7 242 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 OR51A4Q8NGJ6 313 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 PP6455Q8WZ26 134 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 SPSB4Q96A44 273 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 REEP6Q96HR9 211 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 TECTBQ96PL2 329 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 OR2V2Q96R30 315 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 BEX2Q9BXY8 128 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 SHARPINQ9H0F6 387 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 PPP1R3CQ9UQK1 317 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 WIPI2Q9Y4P8 454 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 PEX16Q9Y5Y5 336 aa11.35□□□□□ -0.59
CLK3-218ENST00000566926 GGT3PA6NGU5 568 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 PIN1P1O15428 100 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 TGFBR1P36897 503 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 GNALP38405 381 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 DDOSTP39656 456 aa11.34□□□□□ -0.59
CLK3-218ENST00000566926 MAP2K3P46734 347 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms