RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 AKR7A2O43488 359 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 NCR1O76036 304 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 IGHV3-13P01766 116 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 EIF4EP06730 217 aaKnown RBP8.43□□□□□ -1.06
SF3B3-207ENST00000566095 MELTFP08582 738 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 CSF3P09919 207 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 AZGP1P25311 298 aaKnown RBP8.43□□□□□ -1.06
SF3B3-207ENST00000566095 APOBEC3AP31941 199 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-207ENST00000566095 PMELP40967 661 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 POU3F4P49335 361 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 MTCP1P56278 107 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 CAV3P56539 151 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 GNG3P63215 75 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 IFITM3Q01628 133 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 SPOCK1Q08629 439 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 PRDX4Q13162 271 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 HLXQ14774 488 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-207ENST00000566095 OR8G1Q15617 311 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 NKPD1Q17RQ9 610 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 CEACAM21Q3KPI0 293 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 C2orf76Q3KRA6 126 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 PYDC2Q56P42 97 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 SPATA46Q5T0L3 261 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 OR2T2Q6IF00 324 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 MOB3CQ70IA8 216 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 MYPOPQ86VE0 399 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-207ENST00000566095 DMRTC2Q8IXT2 367 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-207ENST00000566095 OR5AS1Q8N127 324 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 FBXL14Q8N1E6 418 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 Q8NFD4 153 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 PXT1Q8NFP0 134 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 OR4M1Q8NGD0 313 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 LINC01560Q8TB33 94 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 LGALS14Q8TCE9 139 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 MRPL24Q96A35 216 aaKnown RBP8.43□□□□□ -1.06
SF3B3-207ENST00000566095 RFT1Q96AA3 541 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 SLC25A38Q96DW6 304 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 SPOCK3Q9BQ16 436 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 PLK3Q9H4B4 646 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 RBFOX1Q9NWB1 397 aaKnown RBP8.43□□□□□ -1.06
SF3B3-207ENST00000566095 ZDHHC8Q9ULC8 765 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 POLDIP2Q9Y2S7 368 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 HIVEP3Q5T1R4 2406 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 KALRNO60229 2985 aa8.43□□□□□ -1.06
SF3B3-207ENST00000566095 ANKHD1Q8IWZ3 2542 aaKnown RBP8.42□□□□□ -1.06
SF3B3-207ENST00000566095 SETXQ7Z333 2677 aaKnown RBP8.42□□□□□ -1.06
SF3B3-207ENST00000566095 IGLV3-9A0A075B6K5 115 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A10PA6NDY2 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A18PA6NE21 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A16PA6NEW6 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 WIPF3A6NGB9 483 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A20PA6NIJ5 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A8PA6NJQ4 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A7PA6NKC0 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 ZNF850A8MQ14 1090 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 VGLL3A8MV65 326 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A22PA8MWA6 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 TMEM14DPA8MWL7 114 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A12PA8MX19 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A5PA8MXJ8 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A23PA8MXZ1 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 PAHP00439 452 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A15PP0C7V4 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A13PP0C7W8 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A14PP0C7W9 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM90A24PP0C7X0 464 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 SNRPBP14678 240 aaKnown RBP8.42□□□□□ -1.06
SF3B3-207ENST00000566095 SRP9P49458 86 aaKnown RBP8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FABP6P51161 128 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 ACTBP60709 375 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 SNRPD2P62316 118 aaKnown RBP8.42□□□□□ -1.06
SF3B3-207ENST00000566095 ACTG1P63261 375 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 QRFPP83859 136 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 PSG7Q13046 419 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 DAZAP2Q15038 168 aaPredicted RBP8.42□□□□□ -1.06
SF3B3-207ENST00000566095 VHLLQ6RSH7 139 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FIP1L1Q6UN15 594 aaKnown RBP8.42□□□□□ -1.06
SF3B3-207ENST00000566095 MEX3BQ6ZN04 569 aaKnown RBP8.42□□□□□ -1.06
SF3B3-207ENST00000566095 TMEM200AQ86VY9 491 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 MKXQ8IYA7 352 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 CMTM4Q8IZR5 234 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 CENPSQ8N2Z9 138 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 FAM89BQ8N5H3 189 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 UBASH3BQ8TF42 649 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 CHAC2Q8WUX2 184 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 TMEM171Q8WVE6 324 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 TRIM63Q969Q1 353 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 PIK3IP1Q96FE7 263 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 DHRS9Q9BPW9 319 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 THAP7Q9BT49 309 aaPredicted RBP8.42□□□□□ -1.06
SF3B3-207ENST00000566095 URM1Q9BTM9 101 aaKnown RBP8.42□□□□□ -1.06
SF3B3-207ENST00000566095 ADAT1Q9BUB4 502 aaKnown RBP8.42□□□□□ -1.06
SF3B3-207ENST00000566095 CXXC4Q9H2H0 198 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 MS4A5Q9H3V2 200 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 ABCB10Q9NRK6 738 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 GPR173Q9NS66 373 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 CRIM1Q9NZV1 1036 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 DUSP13Q9UII6 198 aa8.42□□□□□ -1.06
SF3B3-207ENST00000566095 ZFYVE26Q68DK2 2539 aa8.41□□□□□ -1.06
SF3B3-207ENST00000566095 FAM230AA0A1W2PPH8 454 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 287.1 ms