RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 NAT2P11245 290 aa26.08■■□□□ 1.77
CTCF-203ENST00000566078 Q6ZR03 302 aa26.08■■□□□ 1.77
CTCF-203ENST00000566078 ABCG5Q9H222 651 aa26.08■■□□□ 1.77
CTCF-203ENST00000566078 MSL2Q9HCI7 577 aa26.08■■□□□ 1.77
CTCF-203ENST00000566078 NOP16Q9Y3C1 178 aaKnown RBP26.08■■□□□ 1.77
CTCF-203ENST00000566078 H0YL77 283 aa26.07■■□□□ 1.76
CTCF-203ENST00000566078 MLNRO43193 412 aa26.07■■□□□ 1.76
CTCF-203ENST00000566078 ALDH3B1P43353 468 aa26.07■■□□□ 1.76
CTCF-203ENST00000566078 SELENOVP59797 346 aa26.07■■□□□ 1.76
CTCF-203ENST00000566078 GNG3P63215 75 aa26.07■■□□□ 1.76
CTCF-203ENST00000566078 UNC119Q13432 240 aa26.07■■□□□ 1.76
CTCF-203ENST00000566078 CALHM1Q8IU99 346 aa26.07■■□□□ 1.76
CTCF-203ENST00000566078 OR10AD1Q8NGE0 317 aa26.07■■□□□ 1.76
CTCF-203ENST00000566078 FAM46BQ96A09 425 aa26.07■■□□□ 1.76
CTCF-203ENST00000566078 SLC22A4Q9H015 551 aa26.07■■□□□ 1.76
CTCF-203ENST00000566078 MYO18BQ8IUG5 2567 aa26.07■■□□□ 1.76
CTCF-203ENST00000566078 CHD3Q12873 2000 aaKnown RBP26.07■■□□□ 1.76
CTCF-203ENST00000566078 ICE1Q9Y2F5 2266 aa26.07■■□□□ 1.76
CTCF-203ENST00000566078 KIR2DL3P43628 341 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 HAAOP46952 286 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 QRFPP83859 136 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 RAB40AQ8WXH6 277 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 ELL3Q9HB65 397 aaPredicted RBP26.06■■□□□ 1.76
CTCF-203ENST00000566078 GHRLQ9UBU3 117 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 RNF115Q9Y4L5 304 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 C19orf84I3L1E1 186 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 ANGPTL7O43827 346 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 PDZK1IP1Q13113 114 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 IL18Q14116 193 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 SLC22A6Q4U2R8 563 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 OR2W3Q7Z3T1 314 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 ZNF611Q8N823 705 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 OR13G1Q8NGZ3 307 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 PIK3IP1Q96FE7 263 aa26.06■■□□□ 1.76
CTCF-203ENST00000566078 UBR5O95071 2799 aaPredicted RBP26.05■■□□□ 1.76
CTCF-203ENST00000566078 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP26.05■■□□□ 1.76
CTCF-203ENST00000566078 TMEM14DPA8MWL7 114 aa26.05■■□□□ 1.76
CTCF-203ENST00000566078 DEFB108AA8MXU0 73 aa26.05■■□□□ 1.76
CTCF-203ENST00000566078 RAB6AP20340 208 aa26.05■■□□□ 1.76
CTCF-203ENST00000566078 ADIPOQQ15848 244 aa26.05■■□□□ 1.76
CTCF-203ENST00000566078 METAP1DQ6UB28 335 aaPredicted RBP26.05■■□□□ 1.76
CTCF-203ENST00000566078 OR10K1Q8NGX5 313 aa26.05■■□□□ 1.76
CTCF-203ENST00000566078 GTF3AQ92664 365 aaKnown RBP26.05■■□□□ 1.76
CTCF-203ENST00000566078 PTX4Q96A99 478 aa26.05■■□□□ 1.76
CTCF-203ENST00000566078 S100A16Q96FQ6 103 aaKnown RBP26.05■■□□□ 1.76
CTCF-203ENST00000566078 TAAR3PQ9P1P4 343 aa26.05■■□□□ 1.76
CTCF-203ENST00000566078 FBLN5Q9UBX5 448 aa26.05■■□□□ 1.76
CTCF-203ENST00000566078 RAB22AQ9UL26 194 aa26.05■■□□□ 1.76
CTCF-203ENST00000566078 ZNF79Q15937 498 aa26.04■■□□□ 1.76
CTCF-203ENST00000566078 NEUROG1Q92886 237 aa26.04■■□□□ 1.76
CTCF-203ENST00000566078 GAL3ST1Q99999 423 aa26.04■■□□□ 1.76
CTCF-203ENST00000566078 METTL9Q9H1A3 318 aa26.04■■□□□ 1.76
CTCF-203ENST00000566078 ATG5Q9H1Y0 275 aa26.04■■□□□ 1.76
CTCF-203ENST00000566078 PLSCR5A0PG75 271 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 CTAG2O75638 210 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 CRTAPO75718 401 aaPredicted RBP26.03■■□□□ 1.76
CTCF-203ENST00000566078 OR4A8P0C604 315 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 SERPINA2P20848 420 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 PPP5CP53041 499 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 SLC25A26Q70HW3 274 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 WDR86Q86TI4 376 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 BIVMQ86UB2 503 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 IZUMO1Q8IYV9 350 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 TMEM104Q8NE00 496 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 KCNG3Q8TAE7 436 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 BORCS5Q969J3 196 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 HS3ST6Q96QI5 342 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 SOSTQ9BQB4 213 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 CST11Q9H112 138 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 PLK3Q9H4B4 646 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 NKIRAS2Q9NYR9 191 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 A0A1B0GWJ7 208 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 A0A1W2PP11 408 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 E7EQL1 145 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 CDC14BO60729 498 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 MPIG6BO95866 241 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 PLAUP00749 431 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 CD40LGP29965 261 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 RSU1Q15404 277 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 ZNF573Q86YE8 665 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 PXT1Q8NFP0 134 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 BANF2Q9H503 90 aa26.03■■□□□ 1.76
CTCF-203ENST00000566078 IGKV1-12A0A0C4DH73 117 aa26.02■■□□□ 1.76
CTCF-203ENST00000566078 ZSCAN5BA6NJL1 495 aa26.02■■□□□ 1.76
CTCF-203ENST00000566078 F5H5P2 479 aa26.02■■□□□ 1.76
CTCF-203ENST00000566078 IGKV1D-12P01611 117 aa26.02■■□□□ 1.76
CTCF-203ENST00000566078 CDK2P24941 298 aa26.02■■□□□ 1.76
CTCF-203ENST00000566078 LOXP28300 417 aaPredicted RBP26.02■■□□□ 1.76
CTCF-203ENST00000566078 NKPD1Q17RQ9 610 aa26.02■■□□□ 1.76
CTCF-203ENST00000566078 HAGHLQ6PII5 290 aaPredicted RBP26.02■■□□□ 1.76
CTCF-203ENST00000566078 ASCL4Q6XD76 172 aa26.02■■□□□ 1.76
CTCF-203ENST00000566078 OR51F2Q8NH61 342 aa26.02■■□□□ 1.76
CTCF-203ENST00000566078 TMEM59Q9BXS4 323 aa26.02■■□□□ 1.76
CTCF-203ENST00000566078 CXXC4Q9H2H0 198 aa26.02■■□□□ 1.76
CTCF-203ENST00000566078 OR51I2Q9H344 312 aa26.02■■□□□ 1.76
CTCF-203ENST00000566078 A0A0G2JMP0 313 aa26.01■■□□□ 1.75
CTCF-203ENST00000566078 A0A0X1KG70 313 aa26.01■■□□□ 1.75
CTCF-203ENST00000566078 LRP5LA4QPB2 252 aa26.01■■□□□ 1.75
CTCF-203ENST00000566078 VSTM5A8MXK1 200 aa26.01■■□□□ 1.75
CTCF-203ENST00000566078 ROS1P08922 2347 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms