RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 ECDO95905 644 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-206ENST00000565990 ISG15P05161 165 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 SOD3P08294 240 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 PSMB10P40306 273 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 NKX2-5P52952 324 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-206ENST00000565990 NANOS3P60323 173 aaKnown RBP10.79□□□□□ -0.68
SF3B3-206ENST00000565990 FAM3AP98173 230 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 GPR176Q14439 515 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 ACSM3Q53FZ2 586 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 WDR38Q5JTN6 314 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 C11orf71Q6IPW1 123 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 VHLLQ6RSH7 139 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 FAM220AQ7Z4H9 259 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 CEACAM19Q7Z692 300 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 FBXL14Q8N1E6 418 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 MUC15Q8N387 334 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 OR4M1Q8NGD0 313 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 TRMT10AQ8TBZ6 339 aaKnown RBP10.79□□□□□ -0.68
SF3B3-206ENST00000565990 PGAM5Q96HS1 289 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 LYZL4Q96KX0 146 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 LIME1Q9H400 295 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 OPA3Q9H6K4 179 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 BRD7Q9NPI1 651 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 CBLN4Q9NTU7 201 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 NLKQ9UBE8 527 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 FBXO9Q9UK97 447 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-206ENST00000565990 SLC22A13Q9Y226 551 aa10.79□□□□□ -0.68
SF3B3-206ENST00000565990 SIRT4Q9Y6E7 314 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-206ENST00000565990 A0A1B0GTI1 187 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 LOC390937A0A1W2PQ73 354 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 OR4C45A6NMZ5 311 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 PAX1P15863 534 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 CCL1P22362 96 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 MAPK3P27361 379 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-206ENST00000565990 GCH1P30793 250 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 MPV17P39210 176 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 KIR3DL2P43630 455 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 CAV3P56539 151 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 KLF3P57682 345 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-206ENST00000565990 GNG2P59768 71 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 AP3S2P59780 193 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 SELENOVP59797 346 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 ALKBH1Q13686 389 aaKnown RBP10.78□□□□□ -0.68
SF3B3-206ENST00000565990 UBE2NLQ5JXB2 153 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 SPATA46Q5T0L3 261 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 THOC7Q6I9Y2 204 aaKnown RBP10.78□□□□□ -0.68
SF3B3-206ENST00000565990 PGAP1Q75T13 922 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 SAMD12Q8N8I0 201 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 UPRTQ96BW1 309 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 REEP6Q96HR9 211 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 UBTD1Q9HAC8 227 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 MYEF2Q9P2K5 600 aaKnown RBP10.78□□□□□ -0.68
SF3B3-206ENST00000565990 DUSP13Q9UII6 198 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 PURGQ9UJV8 347 aaKnown RBP10.78□□□□□ -0.68
SF3B3-206ENST00000565990 ING4Q9UNL4 249 aa10.78□□□□□ -0.68
SF3B3-206ENST00000565990 RBMX2Q9Y388 322 aaKnown RBP10.78□□□□□ -0.68
SF3B3-206ENST00000565990 A0A0G2JMP0 313 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 A0A0X1KG70 313 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 hCG_38984A0A1B0GV85 526 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 ANKRD34BA5PLL1 514 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 IQCF6A8MYZ5 107 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 EIF4EP06730 217 aaKnown RBP10.77□□□□□ -0.69
SF3B3-206ENST00000565990 CALCBP10092 127 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 SELEP16581 610 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 CFPP27918 469 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 OR8B8Q15620 311 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 ALKBH6Q3KRA9 238 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 BCL2L15Q5TBC7 163 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 BTN2A1Q7KYR7 527 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 SLC7A5P1Q8MH63 180 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 CCDC54Q8NEL0 328 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 OR4M2Q8NGB6 313 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 OR2AE1Q8NHA4 323 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 OR51E1Q8TCB6 317 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 RAB40AQ8WXH6 277 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 GHSRQ92847 366 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 SOX7Q9BT81 388 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 ABCG5Q9H222 651 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 MCUBQ9NWR8 336 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 GPR160Q9UJ42 338 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 FZR1Q9UM11 496 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 LAMP3Q9UQV4 416 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 ETV7Q9Y603 341 aa10.77□□□□□ -0.69
SF3B3-206ENST00000565990 TRBV2A0A0J9YWF9 115 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 LINC00854A0A1B0GVQ3 168 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 CD300LBA8K4G0 201 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 NCR1O76036 304 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 ZFPL1O95159 310 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 RAF1P04049 648 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 GSK3AP49840 483 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 CD83Q01151 205 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 SLC3A1Q07837 685 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 TMEM244Q5VVB8 128 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 OR2T2Q6IF00 324 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 DOK3Q7L591 496 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 MRPL21Q7Z2W9 205 aaKnown RBP10.76□□□□□ -0.69
SF3B3-206ENST00000565990 NR2C2APQ86WQ0 139 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 TOMM5Q8N4H5 51 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 OR8G5Q8NG78 346 aa10.76□□□□□ -0.69
SF3B3-206ENST00000565990 ANGPTL6Q8NI99 470 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms