RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 RAG2P55895 527 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 DLX1P56177 255 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 CAV3P56539 151 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 CXCR4P61073 352 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 ZNF322Q6U7Q0 402 aaPredicted RBP12.86□□□□□ -0.35
CDH3-204ENST00000565453 Q6ZSR3 168 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 MOB3CQ70IA8 216 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 SLC35F2Q8IXU6 374 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 MED30Q96HR3 178 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 MNTQ99583 582 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 APOL4Q9BPW4 351 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 SIRT7Q9NRC8 400 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 SLC25A10Q9UBX3 287 aaPredicted RBP12.86□□□□□ -0.35
CDH3-204ENST00000565453 IKZF2Q9UKS7 526 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 PIGLQ9Y2B2 252 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 MAB21L2Q9Y586 359 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 A0A1B0GTI1 187 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 A0A1B0GUS0 222 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 IGHV4-59P01825 116 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 FASP25445 335 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 RPL15P61313 204 aaKnown RBP12.85□□□□□ -0.35
CDH3-204ENST00000565453 PRB3Q04118 309 aaPredicted RBP12.85□□□□□ -0.35
CDH3-204ENST00000565453 TMEM42Q69YG0 159 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 C1orf122Q6ZSJ8 110 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 THAP5Q7Z6K1 395 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 AMIGO2Q86SJ2 522 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 COMMD2Q86X83 199 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 ELMOD2Q8IZ81 293 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 CMTM4Q8IZR5 234 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 OR4F5Q8NH21 305 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 TBC1D15Q8TC07 691 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 WFDC12Q8WWY7 111 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 H1FXQ92522 213 aaKnown RBP12.85□□□□□ -0.35
CDH3-204ENST00000565453 SEMA6AQ9H2E6 1030 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 MOB1AQ9H8S9 216 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 CLN6Q9NWW5 311 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 MRM2Q9UI43 246 aaKnown RBP12.85□□□□□ -0.35
CDH3-204ENST00000565453 ENPP5Q9UJA9 477 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 AP4S1Q9Y587 144 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 R4GMQ9 66 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 V9GYS6 101 aa12.85□□□□□ -0.35
CDH3-204ENST00000565453 MGAM2Q2M2H8 2515 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 LOC110117498-PIK3R3F6TDL0 507 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 M0R1W7 72 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 GPR137BO60478 399 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 CRYBA1P05813 215 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 EGR3Q06889 387 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 KLRD1Q13241 179 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 PLCXD3Q63HM9 321 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 HAGHLQ6PII5 290 aaPredicted RBP12.84□□□□□ -0.35
CDH3-204ENST00000565453 PLEKHG7Q6ZR37 379 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 SSX6Q7RTT6 188 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 ZDHHC13Q8IUH4 622 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 GID4Q8IVV7 300 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 POC1AQ8NBT0 407 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 OR14K1Q8NGZ2 314 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 ZNF671Q8TAW3 534 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 NPRL2Q8WTW4 380 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 LRTOMTQ8WZ04 291 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 DYRK2Q92630 601 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 SDSLQ96GA7 329 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 IL4I1Q96RQ9 567 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 ELL3Q9HB65 397 aaPredicted RBP12.84□□□□□ -0.35
CDH3-204ENST00000565453 BEX1Q9HBH7 125 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 RASL12Q9NYN1 266 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 H2AFY2Q9P0M6 372 aaPredicted RBP12.84□□□□□ -0.35
CDH3-204ENST00000565453 OR52A1Q9UKL2 312 aa12.84□□□□□ -0.35
CDH3-204ENST00000565453 CLPSL1A2RUU4 121 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 ZNF670-ZNF695F2Z2N8 137 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 SYNGR1O43759 233 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 MTRF1O75570 445 aaKnown RBP12.83□□□□□ -0.36
CDH3-204ENST00000565453 NRASP01111 189 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 NDUFB7P17568 137 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 POLR2IP36954 125 aaKnown RBP12.83□□□□□ -0.36
CDH3-204ENST00000565453 GABRA2P47869 451 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 RASSF2P50749 326 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 GUCA2AQ02747 115 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 TAF9Q16594 264 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 OLFML2AQ68BL7 652 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 ACP7Q6ZNF0 438 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 ZNRF1Q8ND25 227 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 ZNF488Q96MN9 340 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 CIB1Q99828 191 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 ZNRD1Q9P1U0 126 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 TRRAPQ9Y4A5 3859 aa12.83□□□□□ -0.36
CDH3-204ENST00000565453 PQLC2LA1A4F0 135 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 DLGAP1O14490 977 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 NPFFO15130 113 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 WIPF1O43516 503 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 NOS1APO75052 506 aaPredicted RBP12.82□□□□□ -0.36
CDH3-204ENST00000565453 ATP5HO75947 161 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 KNG1P01042 644 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 PGA5P0DJD9 388 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 FCGR1AP12314 374 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 CCL1P22362 96 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 ACTR3P61158 418 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 SRSF4Q08170 494 aaKnown RBP12.82□□□□□ -0.36
CDH3-204ENST00000565453 CLVS2Q5SYC1 327 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 ZNF684Q5T5D7 378 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 BCL2L15Q5TBC7 163 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms