RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 METTL8Q9H825 291 aaKnown RBP7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 RPRD1BQ9NQG5 326 aaKnown RBP7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 SMPD3Q9NY59 655 aaPredicted RBP7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 TVP23BQ9NYZ1 205 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 PITPNC1Q9UKF7 332 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 COA3Q9Y2R0 106 aaPredicted RBP7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 RRP15Q9Y3B9 282 aaKnown RBP7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 IGLV1-36A0A0B4J1U3 117 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 LOC100130705A0A1B0GUX0 176 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 A0A1W2PPL8 197 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 H0YAE9 185 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 M0R1W7 72 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 NDUFB3O43676 98 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 SYNGR1O43759 233 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 MITFO75030 526 aaPredicted RBP7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 JTBO76095 146 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 GLCEO94923 617 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 CTLA4P16410 223 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 ZNF823P16415 610 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 GGT2P36268 569 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 DLX1P56177 255 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 FMODQ06828 376 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 POU4F2Q12837 409 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 ECH1Q13011 328 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 IL18R1Q13478 541 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 CRMP1Q14194 572 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 ENDOGQ14249 297 aaKnown RBP7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 OR8G1Q15617 311 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 MICBQ29980 383 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 TEX30Q5JUR7 227 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 PRAMEF6Q5VXH4 476 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 MEDAGQ5VYS4 303 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 NXNL2Q5VZ03 156 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 TMEM236Q5W0B7 351 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 ADAMTSL5Q6ZMM2 481 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 COLCA1Q6ZS62 124 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 SLC36A1Q7Z2H8 476 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 MRPL41Q8IXM3 137 aaKnown RBP7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 DHRSXQ8N5I4 330 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 GJC3Q8NFK1 279 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 OR51D1Q8NGF3 324 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 OR5D13Q8NGL4 314 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 TMEM163Q8TC26 289 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 PIFOQ8TCI5 191 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 C17orf50Q8WW18 174 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 RFKQ969G6 155 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 AJUBAQ96IF1 538 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 Q96MT0 163 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 SLC22A4Q9H015 551 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 RIBC2Q9H4K1 309 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 POLE4Q9NR33 117 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 FAM118AQ9NWS6 357 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 HSPE1-MOB4S4R3N1 261 aa7.3□□□□□ -1.24
VPS9D1-205ENST00000565452 H7C1C5 153 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 DCTN6O00399 190 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 GMDSO60547 372 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 FCN3O75636 299 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 ATP6V1G2O95670 118 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 MUC1P15941 1255 aaPredicted RBP7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 SPI1P17947 270 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 EPHA2P29317 976 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 LGALS4P56470 323 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 SNRPGP62308 76 aaKnown RBP7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 LCN6P62502 163 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 HOXA4Q00056 320 aaPredicted RBP7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 AQP6Q13520 282 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 PCK2Q16822 640 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 LRRC36Q1X8D7 754 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 LRRC10Q5BKY1 277 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 LCN1P1Q5VSP4 162 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 LPCAT4Q643R3 524 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 SHFQ7M4L6 423 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 FAM90A1Q86YD7 464 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 CPOQ8IVL8 374 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 GID4Q8IVV7 300 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 IQCF1Q8N6M8 205 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 TCEANCQ8N8B7 351 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 CYB561A3Q8NBI2 242 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 SETD9Q8NE22 299 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 PROKR2Q8NFJ6 384 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 SLC26A10Q8NG04 563 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 OR2AJ1Q8NGZ0 328 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 OR1F12Q8NHA8 337 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 SPRYD4Q8WW59 207 aaPredicted RBP7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 SLC7A6Q92536 515 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 MYDGFQ969H8 173 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 TSSK2Q96PF2 358 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 MYCBPQ99417 103 aaPredicted RBP7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 TEAD3Q99594 435 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 CCL13Q99616 98 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 PITX2Q99697 317 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 APOL4Q9BPW4 351 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 RERGLQ9H628 205 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 C1orf123Q9NWV4 160 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 IMPAD1Q9NX62 359 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 HAO2Q9NYQ3 351 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 ATPIF1Q9UII2 106 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 GMPPBQ9Y5P6 360 aa7.29□□□□□ -1.24
VPS9D1-205ENST00000565452 PTBP3O95758 552 aaKnown RBP7.28□□□□□ -1.24
VPS9D1-205ENST00000565452 HLA-DQA2P01906 255 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms