RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 FBLIM1Q8WUP2 373 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 RORBQ92753 470 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 GCDHQ92947 438 aaPredicted RBP11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 RNF166Q96A37 237 aaPredicted RBP11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 ZNF48Q96MX3 618 aaPredicted RBP11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 ZNF649Q9BS31 505 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 FGF23Q9GZV9 251 aaPredicted RBP11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 VCX3BQ9H321 246 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 FGF20Q9NP95 211 aaPredicted RBP11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 TRIM36Q9NQ86 728 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 GPR84Q9NQS5 396 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 DNAJB11Q9UBS4 358 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 OR52A1Q9UKL2 312 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 MPC1Q9Y5U8 109 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 SNX5Q9Y5X3 404 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 ZNF816-ZNF321PA0A0X1KG74 233 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 AKR7A2O43488 359 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 RPP14O95059 124 aaKnown RBP11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 LHBP01229 141 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 TTRP02766 147 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 SFTPBP07988 381 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 ATP6V1B1P15313 513 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 FAHP16930 419 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 MAP2K3P46734 347 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 NPY4RP50391 375 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 UBA52P62987 128 aaKnown RBP11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 BAMBIQ13145 260 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 IKZF1Q13422 519 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 GALEQ14376 348 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 MICBQ29980 383 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 ODF4Q2M2E3 257 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 TP53I3Q53FA7 332 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 WDR38Q5JTN6 314 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 BCL2L15Q5TBC7 163 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 PLCXD3Q63HM9 321 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 RUSC1-AS1Q66K80 236 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 LAIR2Q6ISS4 152 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 KRT74Q7RTS7 529 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 CATSPERDQ86XM0 798 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 FAM216BQ8N7L0 139 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 SCCPDHQ8NBX0 429 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 HPSE2Q8WWQ2 592 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 OR5P3Q8WZ94 311 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 UPRTQ96BW1 309 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 JAM3Q9BX67 310 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 WDR13Q9H1Z4 485 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 INPP5EQ9NRR6 644 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 TNFRSF19Q9NS68 423 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 ACOXLQ9NUZ1 547 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 PIGLQ9Y2B2 252 aa11.31□□□□□ -0.6
VPS9D1-204ENST00000565023 DNAJC9-AS1A6NH13 148 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 A6NIN4 97 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 ZNF732B4DXR9 585 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 TNFRSF13BO14836 293 aaPredicted RBP11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 NDUFA2O43678 99 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 FCN3O75636 299 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 CST4P01036 141 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 SELLP14151 372 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 OR12D2P58182 307 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 ARF6P62330 175 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 ACTA2P62736 377 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 ACTG2P63267 376 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 TEX36Q5VZQ5 186 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 CD276Q5ZPR3 534 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 FDX2Q6P4F2 183 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 Q6ZSR3 168 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 BTN2A1Q7KYR7 527 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 DOK3Q7L591 496 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 FAM220AQ7Z4H9 259 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 LHFPL3Q86UP9 236 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 PDZD9Q8IXQ8 264 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 SYS1Q8N2H4 156 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 FAM216AQ8WUB2 273 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 ZFAND2BQ8WV99 257 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 DACT3Q96B18 629 aaPredicted RBP11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 MRPL48Q96GC5 212 aaKnown RBP11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 MYCBPQ99417 103 aaPredicted RBP11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 ALG8Q9BVK2 526 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 ERVK13-1Q9NX77 482 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 GNG8Q9UK08 70 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 SLC22A13Q9Y226 551 aa11.3□□□□□ -0.6
VPS9D1-204ENST00000565023 A0A1B0GTI1 187 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 IRGMA1A4Y4 181 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 TMEM210A6NLX4 147 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 SRRM5B3KS81 715 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 P2RY10O00398 339 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 WIPF1O43516 503 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 RHBDL1O75783 438 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 TOX4O94842 621 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 LIMS3P0CW19 117 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 LIMS4P0CW20 117 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 DCKP27707 260 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 CFHR2P36980 270 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 PRB3Q04118 309 aaPredicted RBP11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 RIPPLY1Q0D2K3 151 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 ZBTB37Q5TC79 503 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 GPR157Q5UAW9 335 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 SLC36A1Q7Z2H8 476 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 BATF2Q8N1L9 274 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms