RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 DVL3Q92997 716 aaPredicted RBP6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM45BQ96B21 275 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 FBXO17Q96EF6 278 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 C1orf147Q96MC9 270 aaPredicted RBP6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 NKX3-1Q99801 234 aaPredicted RBP6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 MS4A7Q9GZW8 240 aaPredicted RBP6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 CST11Q9H112 138 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 LPAR5Q9H1C0 372 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 OR10A2Q9H208 303 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 DEPPQ9NTK1 212 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM38BQ9NVV0 291 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 PIPOXQ9P0Z9 390 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 EIF3KQ9UBQ5 218 aaKnown RBP6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 B4GALT7Q9UBV7 327 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 ELF5Q9UKW6 265 aaPredicted RBP6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 PLEKHA6Q9Y2H5 1048 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 WDFY3Q8IZQ1 3526 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 WDR87Q6ZQQ6 2873 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 IGKV1-9A0A0C4DH69 117 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 A0A0G2JMM0 328 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 A0A1W2PPB8 328 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 A0A1W2PRS3 328 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 OR14I1A6ND48 311 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 OR5H15A6NDH6 313 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 WIPF3A6NGB9 483 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 HMSDA8MTL9 139 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 KIR3DP1A8MWS1 328 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 G3V3Q6 166 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 SGCEO43556 437 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 SYNGR3O43761 229 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 CXCL13O43927 109 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 CDC14BO60729 498 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 NEURL1O76050 574 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 HPNP05981 417 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 OR4E1P0C645 316 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 CRYGSP22914 178 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 HABP2Q14520 560 aaPredicted RBP6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 KISS1Q15726 138 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 C9orf152Q5JTZ5 239 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 RTL6Q6ICC9 239 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 DGAT2L7PQ6IED9 249 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 FAHD2BQ6P2I3 314 aaPredicted RBP6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 TEX261Q6UWH6 196 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 CHMP1BQ7LBR1 199 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 SLC16A14Q7RTX9 510 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 TRAPPC6BQ86SZ2 158 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 NAA40Q86UY6 237 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 ZDHHC22Q8N966 263 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 OR2M7Q8NG81 312 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 CPNE2Q96FN4 548 aaPredicted RBP6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 FAHD2AQ96GK7 314 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 LYZL4Q96KX0 146 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 GPER1Q99527 375 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 GAL3ST1Q99999 423 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM59Q9BXS4 323 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 SELENOIQ9C0D9 397 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 CHST5Q9GZS9 411 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 CRLF2Q9HC73 371 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 B3GNT2Q9NY97 397 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF224Q9NZL3 707 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 FOXJ2Q9P0K8 574 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 MYEF2Q9P2K5 600 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 KLK13Q9UKR3 277 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 ANAPC10Q9UM13 185 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 TIMM10BQ9Y5J6 103 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 U3KQ87 197 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 IGKV3D-15A0A087WSY6 115 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 OR6C65A6NJZ3 312 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 E9PLN8 166 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 TSPAN4O14817 238 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 SLC25A17O43808 307 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF24P17028 368 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 HTR2BP41595 481 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 PTGFRP43088 359 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 CLDN15P56746 228 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 GMFBP60983 142 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 GK2Q14410 553 aaPredicted RBP6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 KRTAP27-1Q3LI81 207 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 ACTBL2Q562R1 376 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 DCAF10Q5QP82 559 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 SPINK14Q6IE38 97 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 MUC20Q8N307 709 aaPredicted RBP6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 GALNT16Q8N428 558 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 STEAP2Q8NFT2 490 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 OR1F12Q8NHA8 337 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 TNFAIP8L1Q8WVP5 186 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 HAS2Q92819 552 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 RAB3CQ96E17 227 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 SLC6A7Q99884 636 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 LINC00470Q9BZP3 86 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 TINAGL1Q9GZM7 467 aaPredicted RBP6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 RGCCQ9H4X1 137 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF552Q9H707 407 aaPredicted RBP6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 RNF122Q9H9V4 155 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM9BQ9NQ34 198 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 IFT46Q9NQC8 304 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 PARPBPQ9NWS1 579 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 SLC23A1Q9UHI7 598 aa6.33□□□□□ -1.4
HERPUD1-209ENST00000564678 OPN4Q9UHM6 478 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms