RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 FAM118AQ9NWS6 357 aa15.22■□□□□ 0.03
SYNGR3-204ENST00000564642 IGHV3OR16-10A0A075B7F0 116 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 H3BSH0 61 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 CCL1P22362 96 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 IKZF1Q13422 519 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 LRRC10Q5BKY1 277 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 ATPAF1Q5TC12 328 aaPredicted RBP15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 TMEM42Q69YG0 159 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 STUMQ69YW2 141 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 ZNF573Q86YE8 665 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 ACBD7Q8N6N7 88 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 FAM216BQ8N7L0 139 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 RHOXF1Q8NHV9 184 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 AQP3Q92482 292 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 MRPL48Q96GC5 212 aaKnown RBP15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 MED30Q96HR3 178 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 MYCBPQ99417 103 aaPredicted RBP15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 PCGF1Q9BSM1 259 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 DNTTIP1Q9H147 329 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 ACOXLQ9NUZ1 547 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 NLKQ9UBE8 527 aa15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 EXOGQ9Y2C4 368 aaKnown RBP15.21■□□□□ 0.03
SYNGR3-204ENST00000564642 TRAV40A0A0B4J280 105 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 A0A1B0GW55 424 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 ZNF879B4DU55 563 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 J3QRE1 110 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 GPR37O15354 613 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 TOX4O94842 621 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 DUX4L2P0CJ85 424 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 DUX4L3P0CJ86 424 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 DUX4L4P0CJ87 422 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 DUX4L5P0CJ88 424 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 DUX4L6P0CJ89 424 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 DUX4L7P0CJ90 424 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 IGHV4-38-2P0DP08 117 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 DBTP11182 482 aaKnown RBP15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 GABRB1P18505 474 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 HAAOP46952 286 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 TGM4P49221 684 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 ISL1P61371 349 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 CDONQ4KMG0 1287 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 METTL11BQ5VVY1 283 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 DUX4L9Q6RFH8 374 aaPredicted RBP15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 BCL6BQ8N143 479 aaPredicted RBP15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 SMPD3Q9NY59 655 aaPredicted RBP15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 RASL12Q9NYN1 266 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 DUX4Q9UBX2 424 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 SLC7A11Q9UPY5 501 aa15.2■□□□□ 0.02
SYNGR3-204ENST00000564642 ANKRD61A6NGH8 418 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 OR2AT4A6NND4 320 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 J3QLW9 94 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 SLC16A6O15403 523 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 FCN3O75636 299 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 SERPINA3P01011 423 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 UBCP0CG48 685 aaKnown RBP15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 ZNF19P17023 458 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 GABRA2P47869 451 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 OR12D2P58182 307 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 ACTA2P62736 377 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 ACTG2P63267 376 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 IL13RA1P78552 427 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 ZNF91Q05481 1191 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 GPR157Q5UAW9 335 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 TMEM244Q5VVB8 128 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 ZNF788Q6ZQV5 615 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 PRSS35Q8N3Z0 413 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 SIGLECL1Q8N7X8 197 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 ANGPTL6Q8NI99 470 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 LGALS12Q96DT0 336 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 RDH12Q96NR8 316 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 CNTD2Q9H8S5 307 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 RPUSD1Q9UJJ7 312 aaKnown RBP15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 POLDIP2Q9Y2S7 368 aa15.19■□□□□ 0.02
SYNGR3-204ENST00000564642 FAM230AA0A1W2PPH8 454 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 PQLC2LA1A4F0 135 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 J3QT63 122 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 FADS2O95864 444 aaKnown RBP15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 PLATP00750 562 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 HTR1AP08908 422 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 AMY2BP19961 511 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 KIR3DL2P43630 455 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 ARF6P62330 175 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 LRRC36Q1X8D7 754 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 LHFPL3Q86UP9 236 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 RDH10Q8IZV5 341 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 FGFRL1Q8N441 504 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 POC1AQ8NBT0 407 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 OR2G2Q8NGZ5 317 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 TRMT10AQ8TBZ6 339 aaKnown RBP15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 FAM216AQ8WUB2 273 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 H1FXQ92522 213 aaKnown RBP15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 WDFY2Q96P53 400 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 AMBNQ9NP70 447 aa15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 RPL36Q9Y3U8 105 aaKnown RBP15.18■□□□□ 0.02
SYNGR3-204ENST00000564642 LOC107986453A0A1B0GWG9 222 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 SYNGR1O43759 233 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 GATBO75879 557 aaKnown RBP15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 TFF1P04155 84 aa15.17■□□□□ 0.02
SYNGR3-204ENST00000564642 SFTPBP07988 381 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms