RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 RPL31P62899 125 aaKnown RBP11.42□□□□□ -0.58
CDR2-204ENST00000564542 EMX1Q04741 257 aaPredicted RBP11.42□□□□□ -0.58
CDR2-204ENST00000564542 CEACAM21Q3KPI0 293 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 HSP90B2PQ58FF3 399 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 CEP78Q5JTW2 689 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 CYP2R1Q6VVX0 501 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 NDUFA11Q86Y39 141 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 LYG1Q8N1E2 194 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 Q8N2B8 174 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 C11orf42Q8N5U0 333 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 IQCF1Q8N6M8 205 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 OR4F17Q8NGA8 305 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 ZNF671Q8TAW3 534 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 FAM81AQ8TBF8 368 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 THEM6Q8WUY1 208 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 OR4F4Q96R69 305 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 OR51V1Q9H2C8 321 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 MAGIXQ9H6Y5 334 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 NIPAL2Q9H841 368 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 YY1AP1Q9H869 796 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 REEP1Q9H902 201 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 SERTAD4Q9NUC0 356 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 VNN3Q9NY84 501 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 RASL12Q9NYN1 266 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 USE1Q9NZ43 259 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 SAMHD1Q9Y3Z3 626 aaKnown RBP11.42□□□□□ -0.58
CDR2-204ENST00000564542 U3KQV3 271 aa11.42□□□□□ -0.58
CDR2-204ENST00000564542 hCG_1809904A0A1W2PP81 198 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 A0A1W2PPE2 198 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 A0A1W2PR64 198 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 A0A1W2PRV1 198 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 SELENOFO60613 162 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 CD28P10747 220 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 MAP2K3P46734 347 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 LGALS4P56470 323 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 SMIM21Q3B7S5 101 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 TMEM200BQ69YZ2 307 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 OR2T5Q6IEZ7 315 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 HAGHLQ6PII5 290 aaPredicted RBP11.41□□□□□ -0.58
CDR2-204ENST00000564542 C16orf89Q6UX73 402 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 CD300LDQ6UXZ3 194 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 DEFB107AQ8IZN7 70 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 ZNF561Q8N587 486 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 OR2T29Q8NH02 315 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 AQP3Q92482 292 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 SGCDQ92629 289 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 ITFG2Q969R8 447 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 NKX3-1Q99801 234 aaPredicted RBP11.41□□□□□ -0.58
CDR2-204ENST00000564542 NIPSNAP1Q9BPW8 284 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 CDCA4Q9BXL8 241 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 MMP28Q9H239 520 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 AURKAIP1Q9NWT8 199 aaPredicted RBP11.41□□□□□ -0.58
CDR2-204ENST00000564542 NDE1Q9NXR1 346 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 ACTR3BQ9P1U1 418 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 TCF19Q9Y242 345 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 KLHDC2Q9Y2U9 406 aa11.41□□□□□ -0.58
CDR2-204ENST00000564542 NOTCH3Q9UM47 2321 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 A0A0U1RQV5 110 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 TCRBV5S2A0A599 114 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 FAM90A8PA6NJQ4 464 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 RFPL4AA6NLU0 287 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 RFPL4AL1F8VTS6 287 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 H3BN98 237 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 SLC1A7O00341 560 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 PRODHO43272 600 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 COX7A1P24310 79 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 ERVFRD-1P60508 538 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 HABP2Q14520 560 aaPredicted RBP11.4□□□□□ -0.58
CDR2-204ENST00000564542 PLBD1Q6P4A8 553 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 ACP7Q6ZNF0 438 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 CD177Q8N6Q3 437 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 POC1AQ8NBT0 407 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 OR10G2Q8NGC3 310 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 OR5A2Q8NGI9 324 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 WIPF2Q8TF74 440 aaPredicted RBP11.4□□□□□ -0.58
CDR2-204ENST00000564542 PHF21AQ96BD5 680 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 R3HDM4Q96D70 268 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 MED4Q9NPJ6 270 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 TAGLN3Q9UI15 199 aa11.4□□□□□ -0.58
CDR2-204ENST00000564542 ACOD1A6NK06 481 aa11.39□□□□□ -0.59
CDR2-204ENST00000564542 ADARB2-AS1A8MUL3 147 aa11.39□□□□□ -0.59
CDR2-204ENST00000564542 PRR23D1E9PI22 279 aaPredicted RBP11.39□□□□□ -0.59
CDR2-204ENST00000564542 SNX3O60493 162 aa11.39□□□□□ -0.59
CDR2-204ENST00000564542 PRR23D2P0DMB1 279 aaPredicted RBP11.39□□□□□ -0.59
CDR2-204ENST00000564542 ATP6V1B1P15313 513 aa11.39□□□□□ -0.59
CDR2-204ENST00000564542 CCL3L1P16619 93 aa11.39□□□□□ -0.59
CDR2-204ENST00000564542 GK3PQ14409 553 aa11.39□□□□□ -0.59
CDR2-204ENST00000564542 CNN3Q15417 329 aaKnown RBP11.39□□□□□ -0.59
CDR2-204ENST00000564542 ZBTB37Q5TC79 503 aa11.39□□□□□ -0.59
CDR2-204ENST00000564542 PLCXD3Q63HM9 321 aa11.39□□□□□ -0.59
CDR2-204ENST00000564542 TRPM8Q7Z2W7 1104 aa11.39□□□□□ -0.59
CDR2-204ENST00000564542 KRT77Q7Z794 578 aa11.39□□□□□ -0.59
CDR2-204ENST00000564542 LHFPL4Q7Z7J7 247 aa11.39□□□□□ -0.59
CDR2-204ENST00000564542 FOXRED1Q96CU9 486 aaPredicted RBP11.39□□□□□ -0.59
CDR2-204ENST00000564542 CITED2Q99967 270 aaPredicted RBP11.39□□□□□ -0.59
CDR2-204ENST00000564542 FAM107BQ9H098 131 aa11.39□□□□□ -0.59
CDR2-204ENST00000564542 FAM206AQ9NX38 181 aa11.39□□□□□ -0.59
CDR2-204ENST00000564542 TBL2Q9Y4P3 447 aaKnown RBP11.39□□□□□ -0.59
CDR2-204ENST00000564542 KMT2CQ8NEZ4 4911 aaKnown RBP11.39□□□□□ -0.59
CDR2-204ENST00000564542 ARRDC5A6NEK1 342 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms