RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SNTG1Q9NSN8 517 aa12.32□□□□□ -0.44
SPG7-210ENST00000564409 ZNRD1Q9P1U0 126 aa12.32□□□□□ -0.44
SPG7-210ENST00000564409 A0A1W2PPH5 198 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 A0A1W2PQ09 198 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 CCDC182A6NF36 153 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 RNASEK-C17orf49H0YIS7 233 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 M0QZ24 198 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 WIPF1O43516 503 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 CLPXO76031 633 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 NDUFB7P17568 137 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 DAPP51397 102 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 HCCSP53701 268 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 GMFBP60983 142 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 ELF3P78545 371 aaPredicted RBP12.31□□□□□ -0.44
SPG7-210ENST00000564409 DGUOKQ16854 277 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 SMIM21Q3B7S5 101 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 ZNF684Q5T5D7 378 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 NXNL2Q5VZ03 156 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 MEPCEQ7L2J0 689 aaKnown RBP12.31□□□□□ -0.44
SPG7-210ENST00000564409 ZNF573Q86YE8 665 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 Q8N7P7 452 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 ZSCAN4Q8NAM6 433 aaPredicted RBP12.31□□□□□ -0.44
SPG7-210ENST00000564409 OR51E1Q8TCB6 317 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 AQP3Q92482 292 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 TAF15Q92804 592 aaKnown RBP eCLIP12.31□□□□□ -0.44
SPG7-210ENST00000564409 SDSLQ96GA7 329 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 FGF23Q9GZV9 251 aaPredicted RBP12.31□□□□□ -0.44
SPG7-210ENST00000564409 GPR84Q9NQS5 396 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 SIRT7Q9NRC8 400 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 KRT84Q9NSB2 600 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 VPREB3Q9UKI3 123 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 IKZF2Q9UKS7 526 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.31□□□□□ -0.44
SPG7-210ENST00000564409 PIGLQ9Y2B2 252 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 RNF114Q9Y508 228 aa12.31□□□□□ -0.44
SPG7-210ENST00000564409 WNK1Q9H4A3 2382 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 IGKV1D-17A0A075B6S4 117 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 DLGAP1O14490 977 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 PRKYO43930 277 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 NOS1APO75052 506 aaPredicted RBP12.3□□□□□ -0.44
SPG7-210ENST00000564409 RHBDL1O75783 438 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 PAHP00439 452 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 NRASP01111 189 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 PSG2P11465 335 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 TGFBR2P37173 567 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 GABRA2P47869 451 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 RASSF2P50749 326 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 EFNB1P98172 346 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 EGR3Q06889 387 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 CEP78Q5JTW2 689 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 CLVS2Q5SYC1 327 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 PLCXD3Q63HM9 321 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 BRICD5Q6PL45 260 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 ZNF322Q6U7Q0 402 aaPredicted RBP12.3□□□□□ -0.44
SPG7-210ENST00000564409 MOB3CQ70IA8 216 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 GID4Q8IVV7 300 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 PDZD9Q8IXQ8 264 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 LINC01006Q8NI28 216 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 TNFRSF14Q92956 283 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 C16orf95Q9H693 158 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 ZNF222Q9UK12 451 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 POLDIP2Q9Y2S7 368 aa12.3□□□□□ -0.44
SPG7-210ENST00000564409 SF3B6Q9Y3B4 125 aaKnown RBP12.3□□□□□ -0.44
SPG7-210ENST00000564409 hCG_1809904A0A1W2PP81 198 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 A0A1W2PPE2 198 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 A0A1W2PR64 198 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 A0A1W2PRV1 198 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 LOC110117498-PIK3R3F6TDL0 507 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 G3V2T6 193 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 PSMD9O00233 223 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 SRSF10O75494 262 aaKnown RBP12.29□□□□□ -0.44
SPG7-210ENST00000564409 TTRP02766 147 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 MRPL3P09001 348 aaKnown RBP12.29□□□□□ -0.44
SPG7-210ENST00000564409 SELLP14151 372 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 FAHP16930 419 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 SAA4P35542 130 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 CXCR4P61073 352 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 ATP6AP1Q15904 470 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 MIDNQ504T8 468 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 BCL2L15Q5TBC7 163 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 SLX4IPQ5VYV7 408 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 TMEM42Q69YG0 159 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 DHRS7BQ6IAN0 325 aaPredicted RBP12.29□□□□□ -0.44
SPG7-210ENST00000564409 HAGHLQ6PII5 290 aaPredicted RBP12.29□□□□□ -0.44
SPG7-210ENST00000564409 Q6ZSR3 168 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 ZDHHC13Q8IUH4 622 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 ELMOD2Q8IZ81 293 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 ZNF561Q8N587 486 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 POC1AQ8NBT0 407 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 TMEM163Q8TC26 289 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 DUS3LQ96G46 650 aaKnown RBP12.29□□□□□ -0.44
SPG7-210ENST00000564409 FAM234AQ9H0X4 552 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 CLN6Q9NWW5 311 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 COPS3Q9UNS2 423 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 SNX5Q9Y5X3 404 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 R4GMQ9 66 aa12.29□□□□□ -0.44
SPG7-210ENST00000564409 MEIOCA2RUB1 952 aa12.28□□□□□ -0.44
SPG7-210ENST00000564409 ZAR1LA6NP61 321 aa12.28□□□□□ -0.44
SPG7-210ENST00000564409 ZNF670-ZNF695F2Z2N8 137 aa12.28□□□□□ -0.44
SPG7-210ENST00000564409 J3QT63 122 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms