RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 TMEM33P57088 247 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 FABP5Q01469 135 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 HSD17B12Q53GQ0 312 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 FAM76BQ5HYJ3 339 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 HAGHLQ6PII5 290 aaPredicted RBP15.88■□□□□ 0.13
RAB40C-207ENST00000563109 UNQ9370/PRO34162Q6UXP9 181 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 SCCPDHQ8NBX0 429 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 C10orf105Q8TEF2 133 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 SLITRK2Q9H156 845 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 TCF7L1Q9HCS4 588 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 TMEM138Q9NPI0 162 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 RNF7Q9UBF6 113 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 FOXJ3Q9UPW0 622 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 POLDIP2Q9Y2S7 368 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 PDZD2O15018 2839 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 ARID1AO14497 2285 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 J3QT63 122 aa15.87■□□□□ 0.13
RAB40C-207ENST00000563109 CDIPTO14735 213 aa15.87■□□□□ 0.13
RAB40C-207ENST00000563109 GALP22466 123 aa15.87■□□□□ 0.13
RAB40C-207ENST00000563109 BDKRB2P30411 391 aa15.87■□□□□ 0.13
RAB40C-207ENST00000563109 MTCP1P56278 107 aa15.87■□□□□ 0.13
RAB40C-207ENST00000563109 INSL4Q14641 139 aa15.87■□□□□ 0.13
RAB40C-207ENST00000563109 ZNF529Q6P280 563 aa15.87■□□□□ 0.13
RAB40C-207ENST00000563109 LRRC29Q8WV35 223 aa15.87■□□□□ 0.13
RAB40C-207ENST00000563109 RAB1CQ92928 201 aa15.87■□□□□ 0.13
RAB40C-207ENST00000563109 ORAI1Q96D31 301 aa15.87■□□□□ 0.13
RAB40C-207ENST00000563109 STUB1Q9UNE7 303 aa15.87■□□□□ 0.13
RAB40C-207ENST00000563109 TRDV1A0A1B0GX56 115 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 TMEM178BH3BS89 294 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 GPX5O75715 221 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 CYB5AP00167 134 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 CYB5R3P00387 301 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-207ENST00000563109 UCHL1P09936 223 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 SLC25A16P16260 332 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 CD36P16671 472 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 IGFBP3P17936 291 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-207ENST00000563109 GIFP27352 417 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 PMELP40967 661 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 RIN1Q13671 783 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 DDI2Q5TDH0 399 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 ASPHD2Q6ICH7 369 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 WDR82Q6UXN9 313 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 TMEM91Q6ZNR0 172 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 DNM1P46Q6ZS02 220 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 ZNF826PQ6ZT77 177 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 TGIF2LYQ8IUE0 185 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 KRTAP1-3Q8IUG1 177 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 OR51A2Q8NGJ7 313 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 OR10Z1Q8NGY1 313 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 ZNF671Q8TAW3 534 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 Q96MF0 132 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 GPER1Q99527 375 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 PKIBQ9C010 78 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 EXOSC4Q9NPD3 245 aaKnown RBP15.86■□□□□ 0.13
RAB40C-207ENST00000563109 SSR3Q9UNL2 185 aa15.86■□□□□ 0.13
RAB40C-207ENST00000563109 TRAV8-7A0A075B6U6 113 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 TRIM64BA6NI03 449 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 PIN1P1O15428 100 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 PLATP00750 562 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 ALDOBP05062 364 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 POU3F4P49335 361 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 TIMM50Q3ZCQ8 353 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 FAM27D1Q5T7N8 215 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 CD200R1LQ6Q8B3 271 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 SATL1Q86VE3 508 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 C11orf53Q8IXP5 236 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 NKAIN3Q8N8D7 197 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 BOLLQ8N9W6 283 aaKnown RBP15.85■□□□□ 0.13
RAB40C-207ENST00000563109 AQP3Q92482 292 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 SPACA5Q96QH8 159 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 BPESC1Q9GZL8 116 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 DCAF16Q9NXF7 216 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 NPTNQ9Y639 398 aa15.85■□□□□ 0.13
RAB40C-207ENST00000563109 IGKV1-27A0A075B6S5 117 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 IGHV4-30-2A0A087WSY4 118 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 ISPDA4D126 451 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 MEGF11A6BM72 1044 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 CYSRT1A8MQ03 144 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 MAS1P04201 325 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 MYL9P24844 172 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 MPZP25189 248 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 CALRP27797 417 aaKnown RBP15.84■□□□□ 0.13
RAB40C-207ENST00000563109 BTG1P62324 171 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 IL24Q13007 206 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 KISS1Q15726 138 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 ANGPTL5Q86XS5 388 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 MKXQ8IYA7 352 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 PNLDC1Q8NA58 520 aaKnown RBP15.84■□□□□ 0.13
RAB40C-207ENST00000563109 OR52N4Q8NGI2 321 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 RFT1Q96AA3 541 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 SCOCQ9UIL1 159 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 GSTK1Q9Y2Q3 226 aa15.84■□□□□ 0.13
RAB40C-207ENST00000563109 CSMD2Q7Z408 3487 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 PPIAL4EA0A075B759 164 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 PPIAL4DF5H284 164 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 SYNGR1O43759 233 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 RHBDL1O75783 438 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 PPIAL4FP0DN26 164 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 GADD45AP24522 165 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 ZNF93P35789 620 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms