RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 FRRS1LQ9P0K9 344 aa13.81□□□□□ -0.2
CDT1-202ENST00000562747 LOC107986453A0A1B0GWG9 222 aa13.8□□□□□ -0.2
CDT1-202ENST00000562747 TNFRSF13BO14836 293 aaPredicted RBP13.8□□□□□ -0.2
CDT1-202ENST00000562747 PITPNBP48739 271 aa13.8□□□□□ -0.2
CDT1-202ENST00000562747 NPY4RP50391 375 aa13.8□□□□□ -0.2
CDT1-202ENST00000562747 MICBQ29980 383 aa13.8□□□□□ -0.2
CDT1-202ENST00000562747 LYPD2Q6UXB3 125 aa13.8□□□□□ -0.2
CDT1-202ENST00000562747 FAM90A1Q86YD7 464 aa13.8□□□□□ -0.2
CDT1-202ENST00000562747 C12orf43Q96C57 262 aaKnown RBP13.8□□□□□ -0.2
CDT1-202ENST00000562747 TMPRSS13Q9BYE2 586 aa13.8□□□□□ -0.2
CDT1-202ENST00000562747 GPR173Q9NS66 373 aa13.8□□□□□ -0.2
CDT1-202ENST00000562747 CLN8Q9UBY8 286 aa13.8□□□□□ -0.2
CDT1-202ENST00000562747 OR5V1Q9UGF6 321 aa13.8□□□□□ -0.2
CDT1-202ENST00000562747 ANKRD61A6NGH8 418 aa13.79□□□□□ -0.2
CDT1-202ENST00000562747 H0YJX3 145 aa13.79□□□□□ -0.2
CDT1-202ENST00000562747 RPSAP08865 295 aaKnown RBP13.79□□□□□ -0.2
CDT1-202ENST00000562747 NANOS3P60323 173 aaKnown RBP13.79□□□□□ -0.2
CDT1-202ENST00000562747 ALKBH1Q13686 389 aaKnown RBP13.79□□□□□ -0.2
CDT1-202ENST00000562747 ZNF841Q6ZN19 808 aa13.79□□□□□ -0.2
CDT1-202ENST00000562747 ZNF573Q86YE8 665 aa13.79□□□□□ -0.2
CDT1-202ENST00000562747 ZNF671Q8TAW3 534 aa13.79□□□□□ -0.2
CDT1-202ENST00000562747 TFAP2CQ92754 450 aa13.79□□□□□ -0.2
CDT1-202ENST00000562747 TECTBQ96PL2 329 aa13.79□□□□□ -0.2
CDT1-202ENST00000562747 ISG20L2Q9H9L3 353 aaKnown RBP13.79□□□□□ -0.2
CDT1-202ENST00000562747 ERVK-18Q9QC07 812 aa13.79□□□□□ -0.2
CDT1-202ENST00000562747 KAAG1Q9UBP8 84 aa13.79□□□□□ -0.2
CDT1-202ENST00000562747 A6NIN4 97 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 H0YHG0 523 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 TRAPPC2LH3BP13 241 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.78□□□□□ -0.2
CDT1-202ENST00000562747 ADAM20O43506 726 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 GATBO75879 557 aaKnown RBP13.78□□□□□ -0.2
CDT1-202ENST00000562747 GYPAP02724 150 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 GNAO1P09471 354 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 LIMS3P0CW19 117 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 LIMS4P0CW20 117 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 GBX2P52951 348 aaPredicted RBP13.78□□□□□ -0.2
CDT1-202ENST00000562747 DMRTC1Q5HYR2 192 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 WDR25Q64LD2 544 aaPredicted RBP13.78□□□□□ -0.2
CDT1-202ENST00000562747 RDH10Q8IZV5 341 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 FBLIM1Q8WUP2 373 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 ZFAND2BQ8WV99 257 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 NRG4Q8WWG1 115 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 PP6455Q8WZ26 134 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 AQP3Q92482 292 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 CHST5Q9GZS9 411 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 C7orf69Q9H7B7 122 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 MMP26Q9NRE1 261 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 CTSZQ9UBR2 303 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 HHLA2Q9UM44 414 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 DIMT1Q9UNQ2 313 aaKnown RBP13.78□□□□□ -0.2
CDT1-202ENST00000562747 CAB39Q9Y376 341 aaPredicted RBP13.78□□□□□ -0.2
CDT1-202ENST00000562747 EXOSC1Q9Y3B2 195 aaKnown RBP13.78□□□□□ -0.2
CDT1-202ENST00000562747 INSIG2Q9Y5U4 225 aa13.78□□□□□ -0.2
CDT1-202ENST00000562747 IGHV3OR15-7A0A075B7D8 119 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 A0A0A6YYJ9 748 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 PQLC2LA1A4F0 135 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 OR4C45A6NMZ5 311 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 H3BSH0 61 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 AKR7A2O43488 359 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 RHBDL1O75783 438 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 SERPINA3P01011 423 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 AVPP01185 164 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 CCDC159P0C7I6 412 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 MYL12AP19105 171 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 TGM4P49221 684 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 COMPP49747 757 aaPredicted RBP13.77□□□□□ -0.21
CDT1-202ENST00000562747 ACTG1P63261 375 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 PAX2Q02962 417 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 MED21Q13503 144 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 C11orf91Q3C1V1 193 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 HAGHLQ6PII5 290 aaPredicted RBP13.77□□□□□ -0.21
CDT1-202ENST00000562747 C1orf229Q6ZS94 237 aaPredicted RBP13.77□□□□□ -0.21
CDT1-202ENST00000562747 TMEM80Q96HE8 168 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 DNTTIP1Q9H147 329 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 VCX3BQ9H321 246 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 DNAJB11Q9UBS4 358 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 SLC7A11Q9UPY5 501 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 MGAM2Q2M2H8 2515 aa13.77□□□□□ -0.21
CDT1-202ENST00000562747 ARHGAP32A7KAX9 2087 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 IGHV2-70DA0A0C4DH43 119 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 TMEM212A6NML5 194 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 J3QT63 122 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 TMPRSS2O15393 492 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 KCNAB3O43448 404 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 PIPP12273 146 aaPredicted RBP13.76□□□□□ -0.21
CDT1-202ENST00000562747 GLRA1P23415 457 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 HAAOP46952 286 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 ETV1P50549 477 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 SCGB2A2Q13296 93 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 CNN3Q15417 329 aaKnown RBP13.76□□□□□ -0.21
CDT1-202ENST00000562747 UBE2V2Q15819 145 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 ATPAF1Q5TC12 328 aaPredicted RBP13.76□□□□□ -0.21
CDT1-202ENST00000562747 CD276Q5ZPR3 534 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 STUMQ69YW2 141 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 BTNL3Q6UXE8 466 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 TMPRSS11AQ6ZMR5 421 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 SLC36A1Q7Z2H8 476 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 C1QL2Q7Z5L3 287 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 ZNF676Q8N7Q3 588 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms