RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ZNF404Q494X3 552 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 CEP78Q5JTW2 689 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 TEX36Q5VZQ5 186 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 ZNF826PQ6ZT77 177 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 ZNF573Q86YE8 665 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 MUC20Q8N307 709 aaPredicted RBP8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 MS4A15Q8N5U1 240 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 OR5D14Q8NGL3 314 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 OR13C3Q8NGS6 347 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 ZNF671Q8TAW3 534 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 AQP3Q92482 292 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 SPSB1Q96BD6 273 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 OR5M11Q96RB7 305 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 PKIBQ9C010 78 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 ZCCHC4Q9H5U6 513 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 TMEM165Q9HC07 324 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 GPR173Q9NS66 373 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 SLC7A11Q9UPY5 501 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 PPIAL4AQ9Y536 164 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 IGHV3-64DA0A0J9YX35 117 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 A6NLC8 198 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 F5H0A9 414 aaPredicted RBP8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 J3QT63 122 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 LGALS8O00214 317 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 CDIPTO14735 213 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 NDUFA2O43678 99 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 IGHV2-5P01817 119 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 ALDOBP05062 364 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 CD2P06729 351 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 HEXAP06865 529 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 IGHV4-31P0DP07 118 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 MUC1P15941 1255 aaPredicted RBP8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 CPEP16870 476 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 ZNF20P17024 532 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 PRKACBP22694 351 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 EEF1B2P24534 225 aaKnown RBP8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 GZMKP49863 264 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 RBP2P50120 134 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 EMX1Q04741 257 aaPredicted RBP8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 IL24Q13007 206 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 MLLT11Q13015 90 aaPredicted RBP8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 MED22Q15528 200 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 Q499Y3 187 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 KCTD21Q4G0X4 260 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 AVPI1Q5T686 147 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 ASPHD2Q6ICH7 369 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 UNQ9370/PRO34162Q6UXP9 181 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 SPICQ8N5J4 248 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 THRSPQ92748 146 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 RPL3LQ92901 407 aaKnown RBP8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 C12orf43Q96C57 262 aaKnown RBP8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 RAB39BQ96DA2 213 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 PATZ1Q9HBE1 687 aaKnown RBP8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 ACOT13Q9NPJ3 140 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 DHDHQ9UQ10 334 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 POLR3KQ9Y2Y1 108 aaPredicted RBP8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 MTORP42345 2549 aa8.07□□□□□ -1.12
RABGGTA-221ENST00000561055 IGKV1-27A0A075B6S5 117 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 TRBV5-7A0A0A0MS05 114 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 TRAV38-1A0A0B4J264 116 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 OOEPA6NGQ2 149 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 H3BSH0 61 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 SMAD7O15105 426 aaKnown RBP8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 SULT1B1O43704 296 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 CD5LO43866 347 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 SC5DO75845 299 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 WNT2P09544 360 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 PGA5P0DJD9 388 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 IGFBP3P17936 291 aaPredicted RBP8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 FSTP19883 344 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 PCMT1P22061 227 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 AZGP1P25311 298 aaKnown RBP8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 IL2RGP31785 369 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 RBMXP38159 391 aaKnown RBP8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 HAAOP46952 286 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 ATP1B3P54709 279 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 HNRNPA0Q13151 305 aaKnown RBP8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 TRAM1Q15629 374 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 KCNJ8Q15842 424 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 DMRTC1Q5HYR2 192 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 ATPAF1Q5TC12 328 aaPredicted RBP8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 HAGHLQ6PII5 290 aaPredicted RBP8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 CRIP3Q6Q6R5 217 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 DCDC5Q6ZRR9 648 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 LHFPL2Q6ZUX7 228 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 KCTD8Q6ZWB6 473 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 CALHM1Q8IU99 346 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 SPARTQ8N0X7 666 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 SVOPQ8N4V2 548 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 ZFP41Q8N8Y5 198 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 POC1AQ8NBT0 407 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 MAPK1IP1LQ8NDC0 245 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 LRRC29Q8WV35 223 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 TSEN15Q8WW01 171 aaKnown RBP8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 TMEM106AQ96A25 262 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 BORCS8Q96FH0 119 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 OPALINQ96PE5 141 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 MGLLQ99685 303 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 GAL3ST1Q99999 423 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms