RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ETV1P50549 477 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 UBE2V2Q15819 145 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 TMEM244Q5VVB8 128 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 DCAF12L2Q5VW00 463 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 OR8B3Q8NGG8 313 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 AQP3Q92482 292 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 GGHQ92820 318 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 MRPL48Q96GC5 212 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 OR8B2Q96RD0 313 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 TRIM36Q9NQ86 728 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 KAAG1Q9UBP8 84 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 DIMT1Q9UNQ2 313 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 INSIG2Q9Y5U4 225 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 ANKRD61A6NGH8 418 aa12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 AKR7A2O43488 359 aa12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 FSHBP01225 129 aa12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 PAX8Q06710 450 aa12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 KCNJ8Q15842 424 aa12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 ATPAF1Q5TC12 328 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 HAGHLQ6PII5 290 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 C8orf59Q8N0T1 100 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 C10orf35Q96D05 121 aa12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 ADAT3Q96EY9 351 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 CHST5Q9GZS9 411 aa12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 SMURF1Q9HCE7 757 aa12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 PLCXD1Q9NUJ7 323 aa12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 FBN1P35555 2871 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-213ENST00000560856 LOC105371242A0A075B767 164 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 A0A1B0GW55 424 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 C22orf46C9J442 243 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 ADAM20O43506 726 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 SYNGR1O43759 233 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 XPNPEP2O43895 674 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 DUX4L2P0CJ85 424 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 DUX4L3P0CJ86 424 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 DUX4L4P0CJ87 422 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 DUX4L5P0CJ88 424 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 DUX4L6P0CJ89 424 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 DUX4L7P0CJ90 424 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 MPZP25189 248 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 TGM4P49221 684 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 AQP4P55087 323 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 GNB2P62879 340 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 MICBQ29980 383 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 STUMQ69YW2 141 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 XAF1Q6GPH4 301 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 DUX4L9Q6RFH8 374 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 NLRC3Q7RTR2 1065 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 ZNF485Q8NCK3 441 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 OR51A4Q8NGJ6 313 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 RPS4Y2Q8TD47 263 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 RAB40AQ8WXH6 277 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 C12orf43Q96C57 262 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 MYCBPQ99417 103 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 RASSF4Q9H2L5 321 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 VCXQ9H320 206 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 C7orf69Q9H7B7 122 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 ERVK-18Q9QC07 812 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 DUX4Q9UBX2 424 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 CLN8Q9UBY8 286 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 CLEC2DQ9UHP7 191 aa12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 CAB39Q9Y376 341 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-213ENST00000560856 IGKV1-27A0A075B6S5 117 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 IGHV2-70DA0A0C4DH43 119 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 IGKV1-9A0A0C4DH69 117 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 KIR2DS1A0A191URI9 304 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 IRGMA1A4Y4 181 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 J3QT63 122 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 NOS1APO75052 506 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 ZFPL1O95159 310 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 PIPP12273 146 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 NPY4RP50391 375 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 GTF2A1P52655 376 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 MRPL28Q13084 256 aaKnown RBP12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 OR2G6Q5TZ20 316 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 C1QL2Q7Z5L3 287 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 ZNF573Q86YE8 665 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 CALHM1Q8IU99 346 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 FGFRL1Q8N441 504 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 OR5T2Q8NGG2 359 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 ANGPTL6Q8NI99 470 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 ZNF671Q8TAW3 534 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 FGGYQ96C11 551 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 TMEM80Q96HE8 168 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 CCL13Q99616 98 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 PLEKHA1Q9HB21 404 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 SNTG1Q9NSN8 517 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 FKBP14Q9NWM8 211 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 CNOT2Q9NZN8 540 aaKnown RBP12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 OR5V1Q9UGF6 321 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 PSORS1C1Q9UIG5 152 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 HHLA2Q9UM44 414 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 SIRT4Q9Y6E7 314 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 COL6A5A8TX70 2615 aa12.68□□□□□ -0.38
SNRPA1-213ENST00000560856 LALBAP00709 142 aa12.67□□□□□ -0.38
SNRPA1-213ENST00000560856 TFF1P04155 84 aa12.67□□□□□ -0.38
SNRPA1-213ENST00000560856 ACAA1P09110 424 aaPredicted RBP12.67□□□□□ -0.38
SNRPA1-213ENST00000560856 PGA5P0DJD9 388 aa12.67□□□□□ -0.38
SNRPA1-213ENST00000560856 ADRA2CP18825 462 aa12.67□□□□□ -0.38
SNRPA1-213ENST00000560856 SRP14P37108 136 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms