RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 TRAPPC6BQ86SZ2 158 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 CXorf67Q86X51 503 aaPredicted RBP11.11□□□□□ -0.63
SNX1-211ENST00000560829 FAM169BQ8N8A8 192 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 OR51T1Q8NGJ9 327 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 OR10K1Q8NGX5 313 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 HPSE2Q8WWQ2 592 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 MRPS24Q96EL2 167 aaKnown RBP11.11□□□□□ -0.63
SNX1-211ENST00000560829 Q96M66 194 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 SFXN3Q9BWM7 321 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 PAPOLGQ9BWT3 736 aaKnown RBP11.11□□□□□ -0.63
SNX1-211ENST00000560829 TUBD1Q9UJT1 453 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 A0A0A6YYJ9 748 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 AKR7A2O43488 359 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 SSX5O60225 188 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 PEX14O75381 377 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 TSC22D1Q15714 1073 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 ZDHHC23Q8IYP9 409 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 RPRMLQ8N4K4 120 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 Q8NFD4 153 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 OR4D10Q8NGI6 311 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 NUDCD2Q8WVJ2 157 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 POM121Q96HA1 1249 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 ARHGAP5-AS1Q96IT6 56 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 ST6GAL2Q96JF0 529 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 CDH20Q9HBT6 801 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 CRIM1Q9NZV1 1036 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 EIF3KQ9UBQ5 218 aaKnown RBP11.1□□□□□ -0.63
SNX1-211ENST00000560829 RAXQ9Y2V3 346 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 MPC1Q9Y5U8 109 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 ARHGAP21Q5T5U3 1957 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 IGKV1-12A0A0C4DH73 117 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 A0A1W2PR80 420 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 ZNF736B4DX44 427 aaPredicted RBP11.1□□□□□ -0.63
SNX1-211ENST00000560829 SPRY1O43609 319 aaPredicted RBP11.1□□□□□ -0.63
SNX1-211ENST00000560829 ANGPTL7O43827 346 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 PRAF2O60831 178 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 IGKV1D-12P01611 117 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 IGLV1-44P01699 117 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 CSTBP04080 98 aaKnown RBP11.1□□□□□ -0.63
SNX1-211ENST00000560829 NAT1P18440 290 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 TBPP20226 339 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 RRAS2P62070 204 aaPredicted RBP11.1□□□□□ -0.63
SNX1-211ENST00000560829 RSU1Q15404 277 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 RBMS2Q15434 407 aaKnown RBP11.1□□□□□ -0.63
SNX1-211ENST00000560829 CISD2Q8N5K1 135 aaKnown RBP11.1□□□□□ -0.63
SNX1-211ENST00000560829 OR5A2Q8NGI9 324 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 ST8SIA4Q92187 359 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 FGF23Q9GZV9 251 aaPredicted RBP11.1□□□□□ -0.63
SNX1-211ENST00000560829 TP63Q9H3D4 680 aaPredicted RBP11.1□□□□□ -0.63
SNX1-211ENST00000560829 ELL3Q9HB65 397 aaPredicted RBP11.1□□□□□ -0.63
SNX1-211ENST00000560829 NPDC1Q9NQX5 325 aaPredicted RBP11.1□□□□□ -0.63
SNX1-211ENST00000560829 PCDHB16Q9NRJ7 776 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 AMDHD2Q9Y303 409 aa11.1□□□□□ -0.63
SNX1-211ENST00000560829 MGAQ8IWI9 3026 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 MED12LQ86YW9 2145 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 CEP295Q9C0D2 2601 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 OR5H1A6NKK0 313 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 SERPINE3A8MV23 424 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 RAB3DO95716 219 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 MPZP25189 248 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 CBX5P45973 191 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 GNG2P59768 71 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 MEF2DQ14814 521 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 PPA1Q15181 289 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 ZNF782Q6ZMW2 699 aaPredicted RBP11.09□□□□□ -0.63
SNX1-211ENST00000560829 BHLHA15Q7RTS1 189 aaPredicted RBP11.09□□□□□ -0.63
SNX1-211ENST00000560829 RTN4RL2Q86UN3 420 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 SAXO1Q8IYX7 474 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 GIMAP1Q8WWP7 306 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 MOV10Q9HCE1 1003 aaKnown RBP11.09□□□□□ -0.63
SNX1-211ENST00000560829 ZNF221Q9UK13 617 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 ZNF835Q9Y2P0 537 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 DMXL2Q8TDJ6 3036 aa11.09□□□□□ -0.63
SNX1-211ENST00000560829 ANKRD11Q6UB99 2663 aaPredicted RBP11.08□□□□□ -0.63
SNX1-211ENST00000560829 A0A1B0GUH1 482 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 ANKRD30BLA7E2S9 258 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 PRRG2O14669 202 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 ZNF735P0CB33 412 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 GLI4P10075 376 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 ZNF35P13682 527 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 TUBG1P23258 451 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 BLVRBP30043 206 aaPredicted RBP11.08□□□□□ -0.64
SNX1-211ENST00000560829 EIF2B2P49770 351 aaKnown RBP11.08□□□□□ -0.64
SNX1-211ENST00000560829 UCP2P55851 309 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 PPP1CBP62140 327 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 ATAD3CQ5T2N8 411 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 C1QTNF12Q5T7M4 302 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 ZNF474Q6S9Z5 364 aaPredicted RBP11.08□□□□□ -0.64
SNX1-211ENST00000560829 TMEM200AQ86VY9 491 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 DOLPP1Q86YN1 238 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 CALHM1Q8IU99 346 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 ZNF611Q8N823 705 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 OR51S1Q8NGJ8 323 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 OR8S1Q8NH09 359 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 OR5P3Q8WZ94 311 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 DVL3Q92997 716 aaPredicted RBP11.08□□□□□ -0.64
SNX1-211ENST00000560829 MED30Q96HR3 178 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 OCSTAMPQ9BR26 566 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 PECRQ9BY49 303 aa11.08□□□□□ -0.64
SNX1-211ENST00000560829 OR10A4Q9H209 315 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms