RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 BBC3Q96PG8 261 aaPredicted RBP7.37□□□□□ -1.23
TRAF3-209ENST00000560463 SPACA5Q96QH8 159 aa7.37□□□□□ -1.23
TRAF3-209ENST00000560463 NUDT16L1Q9BRJ7 211 aaKnown RBP7.37□□□□□ -1.23
TRAF3-209ENST00000560463 RTL8AQ9BWD3 113 aa7.37□□□□□ -1.23
TRAF3-209ENST00000560463 PPP1R3EQ9H7J1 279 aa7.37□□□□□ -1.23
TRAF3-209ENST00000560463 ZNF442Q9H7R0 627 aa7.37□□□□□ -1.23
TRAF3-209ENST00000560463 RHOFQ9HBH0 211 aa7.37□□□□□ -1.23
TRAF3-209ENST00000560463 TMEM100Q9NV29 134 aa7.37□□□□□ -1.23
TRAF3-209ENST00000560463 NKIRAS2Q9NYR9 191 aa7.37□□□□□ -1.23
TRAF3-209ENST00000560463 GPR160Q9UJ42 338 aa7.37□□□□□ -1.23
TRAF3-209ENST00000560463 PKDREJQ9NTG1 2253 aa7.37□□□□□ -1.23
TRAF3-209ENST00000560463 KIAA2026Q5HYC2 2103 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 IGKV1-27A0A075B6S5 117 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 TUBAL3A6NHL2 446 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 TMEM210A6NLX4 147 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 ZNF732B4DXR9 585 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 ATP6V1G2-DDX39BF2Z307 99 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 J3QRK9 145 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 CTDSPLO15194 276 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 ZG16O60844 167 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 CYB5AP00167 134 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 CSTBP04080 98 aaKnown RBP7.36□□□□□ -1.23
TRAF3-209ENST00000560463 CD3EP07766 207 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 CHRM2P08172 466 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 TMEM225BP0DP42 221 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 VSIG8P0DPA2 414 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 CA6P23280 308 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 OR3A4PP47883 348 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 MMP15P51511 669 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 MRPS10P82664 201 aaKnown RBP7.36□□□□□ -1.23
TRAF3-209ENST00000560463 QRFPP83859 136 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 PDZK1IP1Q13113 114 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 RSU1Q15404 277 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 OR8G1Q15617 311 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 ZNF79Q15937 498 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 BEX5Q5H9J7 111 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 FAM76BQ5HYJ3 339 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 TMEM69Q5SWH9 247 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 SLC22A25Q6T423 547 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 TMEM200AQ86VY9 491 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 ZNF573Q86YE8 665 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 MKXQ8IYA7 352 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 OR4M1Q8NGD0 313 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 OR8S1Q8NH09 359 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 TMEM171Q8WVE6 324 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 HPSE2Q8WWQ2 592 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 MRPS24Q96EL2 167 aaKnown RBP7.36□□□□□ -1.23
TRAF3-209ENST00000560463 RNF170Q96K19 258 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 C1orf147Q96MC9 270 aaPredicted RBP7.36□□□□□ -1.23
TRAF3-209ENST00000560463 URM1Q9BTM9 101 aaKnown RBP7.36□□□□□ -1.23
TRAF3-209ENST00000560463 ADAT1Q9BUB4 502 aaKnown RBP7.36□□□□□ -1.23
TRAF3-209ENST00000560463 PKIBQ9C010 78 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 SRRQ9GZT4 340 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 METTL9Q9H1A3 318 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 ATG5Q9H1Y0 275 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 C14orf119Q9NWQ9 140 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 IL36GQ9NZH8 169 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 ING4Q9UNL4 249 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 DOPEY1Q5JWR5 2465 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 UBR5O95071 2799 aaPredicted RBP7.36□□□□□ -1.23
TRAF3-209ENST00000560463 CHD6Q8TD26 2715 aa7.36□□□□□ -1.23
TRAF3-209ENST00000560463 ZNF462Q96JM2 2506 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 PLSCR5A0PG75 271 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 ISPDA4D126 451 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 LRP5LA4QPB2 252 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 PRSS44E7EML9 344 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 CDC14BO60729 498 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 LILRA1O75019 489 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 CTAG2O75638 210 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 CRTAPO75718 401 aaPredicted RBP7.35□□□□□ -1.23
TRAF3-209ENST00000560463 UPK1BO75841 260 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 KDM4BO94953 1096 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 CDK2P24941 298 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 MPZP25189 248 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 HAAOP46952 286 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 GPM6AP51674 278 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 IL24Q13007 206 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 UNC119Q13432 240 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 CDSNQ15517 529 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 ALKBH6Q3KRA9 238 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 PYDC2Q56P42 97 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 HACD4Q5VWC8 232 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 RNF144BQ7Z419 303 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 Q8N402 240 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 ZNF611Q8N823 705 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 Q8NFD4 153 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 OR51F2Q8NH61 342 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 LINC01560Q8TB33 94 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 FAM46BQ96A09 425 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 MRPL24Q96A35 216 aaKnown RBP7.35□□□□□ -1.23
TRAF3-209ENST00000560463 RFT1Q96AA3 541 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 PLPPR2Q96GM1 343 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 TMEM59Q9BXS4 323 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 CA10Q9NS85 328 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 CRIM1Q9NZV1 1036 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 DUSP13Q9UII6 198 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 ATP23Q9Y6H3 246 aa7.35□□□□□ -1.23
TRAF3-209ENST00000560463 HRNRQ86YZ3 2850 aaPredicted RBP7.35□□□□□ -1.23
TRAF3-209ENST00000560463 A0A0G2JMP0 313 aa7.34□□□□□ -1.23
TRAF3-209ENST00000560463 A0A0X1KG70 313 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms