RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 PHYHD1Q5SRE7 291 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 HIST2H3PS2Q5TEC6 136 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 HIST2H3AQ71DI3 136 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 C1orf174Q8IYL3 243 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 DYNC2LI1Q8TCX1 351 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 SSMEM1Q8WWF3 244 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 THRSPQ92748 146 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 RPL3LQ92901 407 aaKnown RBP7.77□□□□□ -1.17
SMAD3-215ENST00000560424 NABP1Q96AH0 204 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 ABHD6Q9BV23 337 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 SSBP3Q9BWW4 388 aaPredicted RBP7.77□□□□□ -1.17
SMAD3-215ENST00000560424 KCNN2Q9H2S1 579 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 RERGLQ9H628 205 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 ACOXLQ9NUZ1 547 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 NECAP2Q9NVZ3 263 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 TXNL4BQ9NX01 149 aaKnown RBP7.77□□□□□ -1.17
SMAD3-215ENST00000560424 CCDC59Q9P031 241 aaKnown RBP7.77□□□□□ -1.17
SMAD3-215ENST00000560424 GNG8Q9UK08 70 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 GSTK1Q9Y2Q3 226 aa7.77□□□□□ -1.17
SMAD3-215ENST00000560424 SIRT4Q9Y6E7 314 aaPredicted RBP7.77□□□□□ -1.17
SMAD3-215ENST00000560424 TET2Q6N021 2002 aaPredicted RBP7.77□□□□□ -1.17
SMAD3-215ENST00000560424 TMEM212A6NML5 194 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 E9PI62 339 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 SRSF10O75494 262 aaKnown RBP7.76□□□□□ -1.17
SMAD3-215ENST00000560424 IL1AP01583 271 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 MELTFP08582 738 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 RPS2P15880 293 aaKnown RBP7.76□□□□□ -1.17
SMAD3-215ENST00000560424 ZNF182P17025 639 aaPredicted RBP7.76□□□□□ -1.17
SMAD3-215ENST00000560424 TNFSF4P23510 183 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 APLNRP35414 380 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 RIDAP52758 137 aaKnown RBP7.76□□□□□ -1.17
SMAD3-215ENST00000560424 VBP1P61758 197 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 BTG1P62324 171 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 RPS25P62851 125 aaKnown RBP7.76□□□□□ -1.17
SMAD3-215ENST00000560424 TNFAIP6P98066 277 aaPredicted RBP7.76□□□□□ -1.17
SMAD3-215ENST00000560424 FABP5Q01469 135 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 ALKBH1Q13686 389 aaKnown RBP7.76□□□□□ -1.17
SMAD3-215ENST00000560424 EIF2B1Q14232 305 aaKnown RBP7.76□□□□□ -1.17
SMAD3-215ENST00000560424 SLC36A2Q495M3 483 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 TP53I3Q53FA7 332 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 YIF1BQ5BJH7 314 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 Q6ZTK2 550 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 DCXRQ7Z4W1 244 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 ZNF584Q8IVC4 421 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 SKA3Q8IX90 412 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 MUC20Q8N307 709 aaPredicted RBP7.76□□□□□ -1.17
SMAD3-215ENST00000560424 PAQR4Q8N4S7 273 aaPredicted RBP7.76□□□□□ -1.17
SMAD3-215ENST00000560424 GJC3Q8NFK1 279 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 THEM6Q8WUY1 208 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 NSMAFQ92636 917 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 GHSRQ92847 366 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 MAP6Q96JE9 813 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 AMELYQ99218 206 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 SH3GL3Q99963 347 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 CHCHD6Q9BRQ6 235 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 CENPOQ9BU64 300 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 CDADC1Q9BWV3 514 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 DCSTAMPQ9H295 470 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 MOB1AQ9H8S9 216 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 TMEM106BQ9NUM4 274 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 TMEM38BQ9NVV0 291 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 ZNF224Q9NZL3 707 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 EIF3KQ9UBQ5 218 aaKnown RBP7.76□□□□□ -1.17
SMAD3-215ENST00000560424 CGGBP1Q9UFW8 167 aaPredicted RBP7.76□□□□□ -1.17
SMAD3-215ENST00000560424 ATPIF1Q9UII2 106 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 ZDHHC8Q9ULC8 765 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 LHFPL6Q9Y693 200 aa7.76□□□□□ -1.17
SMAD3-215ENST00000560424 IGHV2-70DA0A0C4DH43 119 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 TRBV2A0A0J9YWF9 115 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 A0A1W2PPL8 197 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 ACOD1A6NK06 481 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 OR4C45A6NMZ5 311 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 ZNF878C9JN71 531 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 GPR137BO60478 399 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 TMEM127O75204 238 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 ISG15P05161 165 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 CST2P09228 141 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 TNFRSF1AP19438 455 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 OTX1P32242 354 aaPredicted RBP7.75□□□□□ -1.17
SMAD3-215ENST00000560424 MDH2P40926 338 aaKnown RBP7.75□□□□□ -1.17
SMAD3-215ENST00000560424 RPS27P42677 84 aaKnown RBP7.75□□□□□ -1.17
SMAD3-215ENST00000560424 GDI2P50395 445 aaKnown RBP7.75□□□□□ -1.17
SMAD3-215ENST00000560424 MMP15P51511 669 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 GRB2P62993 217 aaKnown RBP7.75□□□□□ -1.17
SMAD3-215ENST00000560424 ENDOGQ14249 297 aaKnown RBP7.75□□□□□ -1.17
SMAD3-215ENST00000560424 DGUOKQ16854 277 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 ARL9Q6T311 187 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 UNQ9370/PRO34162Q6UXP9 181 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 TMEM91Q6ZNR0 172 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 SLC16A14Q7RTX9 510 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 DPPA2Q7Z7J5 298 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 LRRC28Q86X40 367 aaPredicted RBP7.75□□□□□ -1.17
SMAD3-215ENST00000560424 SLC22A24Q8N4F4 322 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 YIPF7Q8N8F6 280 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 OR2AJ1Q8NGZ0 328 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 OR2G2Q8NGZ5 317 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 ABHD4Q8TB40 342 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 RAB40AQ8WXH6 277 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 SLAMF6Q96DU3 332 aa7.75□□□□□ -1.17
SMAD3-215ENST00000560424 C4orf45Q96LM5 186 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms