RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 BTNL3Q6UXE8 466 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 D2HGDHQ8N465 521 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 TERB2Q8NHR7 220 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 MARCH1Q8TCQ1 289 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 PARP12Q9H0J9 701 aaKnown RBP12.03□□□□□ -0.48
TRAF3-208ENST00000560371 DHRS3O75911 302 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 IAPPP10997 89 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 EPXP11678 715 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 TAGLN2P37802 199 aaKnown RBP12.03□□□□□ -0.48
TRAF3-208ENST00000560371 RNF24Q9Y225 148 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 XRCC3O43542 346 aa12.02□□□□□ -0.48
TRAF3-208ENST00000560371 MT-ND4LP03901 98 aa12.02□□□□□ -0.48
TRAF3-208ENST00000560371 ACOT6Q3I5F7 207 aaPredicted RBP12.02□□□□□ -0.48
TRAF3-208ENST00000560371 FGF11Q92914 225 aa12.02□□□□□ -0.48
TRAF3-208ENST00000560371 GNPNAT1Q96EK6 184 aaPredicted RBP12.02□□□□□ -0.48
TRAF3-208ENST00000560371 FOXJ3Q9UPW0 622 aa12.02□□□□□ -0.48
TRAF3-208ENST00000560371 M6PRP20645 277 aa12.02□□□□□ -0.48
TRAF3-208ENST00000560371 ZNF425Q6IV72 752 aa12.02□□□□□ -0.48
TRAF3-208ENST00000560371 SLC7A5P1Q8MH63 180 aa12.02□□□□□ -0.48
TRAF3-208ENST00000560371 WDR34Q96EX3 536 aa12.02□□□□□ -0.48
TRAF3-208ENST00000560371 PTDSS2Q9BVG9 487 aa12.02□□□□□ -0.48
TRAF3-208ENST00000560371 CLEC18AA5D8T8 446 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 HNF1AP20823 631 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 GNG10P50151 68 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 CLEC18CQ8NCF0 446 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 ZNF768Q9H5H4 540 aaKnown RBP12.02□□□□□ -0.49
TRAF3-208ENST00000560371 BRCA1P38398 1863 aaKnown RBP12.02□□□□□ -0.49
TRAF3-208ENST00000560371 PHF3Q92576 2039 aaKnown RBP12.02□□□□□ -0.49
TRAF3-208ENST00000560371 OR2M5A3KFT3 312 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 E5RGE8 158 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 AGFG2O95081 481 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 HRASP01112 189 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 NGFP01138 241 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 CT62P0C5K7 136 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 PSMB6P28072 239 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 EXTL1Q92935 676 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 MED9Q9NWA0 146 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 NSG2Q9Y328 171 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 ARPC4-TTLL3A0A0A6YYG9 625 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 TRAV1-2A0A0B4J238 106 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 ZNF724A8MTY0 619 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 SMLR1H3BR10 107 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 TBX19O60806 448 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 GALNSP34059 522 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 EVX1P49640 407 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 PNLIPRP3Q17RR3 467 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 DDOQ99489 341 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 SLC6A13Q9NSD5 602 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 TUBAL3A6NHL2 446 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 SEMG1P04279 462 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 CBR1P16152 277 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 AVPR2P30518 371 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 GP2P55259 537 aaKnown RBP12.02□□□□□ -0.49
TRAF3-208ENST00000560371 Q1RN00 199 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 VMA21Q3ZAQ7 101 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 CBLN3Q6UW01 205 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 LYG1Q8N1E2 194 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 C20orf141Q9NUB4 165 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 FBXO34Q9NWN3 711 aa12.02□□□□□ -0.49
TRAF3-208ENST00000560371 PSME4Q14997 1843 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 SLC17A2O00624 439 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 CD3DP04234 171 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 PRRX1P54821 245 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 DHODHQ02127 395 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 RTP5Q14D33 572 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 OR5D13Q8NGL4 314 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 RTN4IP1Q8WWV3 396 aaPredicted RBP12.01□□□□□ -0.49
TRAF3-208ENST00000560371 TNFRSF19Q9NS68 423 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 KRBOX1C9JBD0 128 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 KRASP01116 189 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 CALHM3Q86XJ0 350 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 TCF20Q9UGU0 1960 aaKnown RBP12.01□□□□□ -0.49
TRAF3-208ENST00000560371 PLPP3O14495 311 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 CCL2P13500 99 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 G0S2P27469 103 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 KIAA0040Q15053 153 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 RPL7L1Q6DKI1 246 aaKnown RBP12.01□□□□□ -0.49
TRAF3-208ENST00000560371 DUS3LQ96G46 650 aaKnown RBP12.01□□□□□ -0.49
TRAF3-208ENST00000560371 SCN5AQ14524 2016 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 M0R1X1 148 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 GPANK1O95872 356 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 MAGEA5P43359 124 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 PLA1AQ53H76 456 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 ACTR3CQ9C0K3 210 aaPredicted RBP12.01□□□□□ -0.49
TRAF3-208ENST00000560371 PSENENQ9NZ42 101 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 AK3Q9UIJ7 227 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 MBP02144 154 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 IL5P05113 134 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 PRR35P0CG20 571 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 PRSS42Q7Z5A4 293 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 UBE3DQ7Z6J8 389 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 OR4S1Q8NGB4 309 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 SP7Q8TDD2 431 aaPredicted RBP12.01□□□□□ -0.49
TRAF3-208ENST00000560371 C4orf45Q96LM5 186 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 UBTD1Q9HAC8 227 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 PLSCR3Q9NRY6 295 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 TMEM182Q6ZP80 229 aaPredicted RBP12.01□□□□□ -0.49
TRAF3-208ENST00000560371 LINC00299Q6ZSB3 139 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 C11orf42Q8N5U0 333 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 NPEPL1Q8NDH3 523 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms