RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 GNG8Q9UK08 70 aa9.64□□□□□ -0.87
RABGGTA-216ENST00000560243 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.64□□□□□ -0.87
RABGGTA-216ENST00000560243 GMPPBQ9Y5P6 360 aa9.64□□□□□ -0.87
RABGGTA-216ENST00000560243 MDFIC2A0A1B0GVS7 189 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 OR5B21A6NL26 309 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 DLGAP1O14490 977 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 SYNGR1O43759 233 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 PLATP00750 562 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 MMP9P14780 707 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 TGM4P49221 684 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 OR12D2P58182 307 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 CLVS2Q5SYC1 327 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 ATPAF1Q5TC12 328 aaPredicted RBP9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 CD276Q5ZPR3 534 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 BRD3OSQ6XYD6 125 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 DOK3Q7L591 496 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 BATF2Q8N1L9 274 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 RHOXF1Q8NHV9 184 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 ANGPTL6Q8NI99 470 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 ITFG2Q969R8 447 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 C12orf43Q96C57 262 aaKnown RBP9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 LGALS12Q96DT0 336 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 GAFA1Q96PS6 74 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 TBX15Q96SF7 602 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 AMBNQ9NP70 447 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 FAM118AQ9NWS6 357 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 DNAJB11Q9UBS4 358 aa9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 RPUSD1Q9UJJ7 312 aaKnown RBP9.63□□□□□ -0.87
RABGGTA-216ENST00000560243 IGKV1D-17A0A075B6S4 117 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 LOC100130705A0A1B0GUX0 176 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 A0A1B0GVI7 797 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 LOC107986453A0A1B0GWG9 222 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 DAPL1A0PJW8 107 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 PQLC2LA1A4F0 135 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 OR2AT4A6NND4 320 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 ZNF879B4DU55 563 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 ANKRD65E5RJM6 399 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 SYT7O43581 403 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 DBTP11182 482 aaKnown RBP9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 GLRA1P23415 457 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 HAAOP46952 286 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 NANOS3P60323 173 aaKnown RBP9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 ARF6P62330 175 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 ZNF91Q05481 1191 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 DGUOKQ16854 277 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 CDONQ4KMG0 1287 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 MEDAGQ5VYS4 303 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 RUSC1-AS1Q66K80 236 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 ZNF788Q6ZQV5 615 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 SLC36A1Q7Z2H8 476 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 ANGPTL5Q86XS5 388 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 OR2G2Q8NGZ5 317 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 TRMT10AQ8TBZ6 339 aaKnown RBP9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 NPRL2Q8WTW4 380 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 WDFY2Q96P53 400 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 MS4A7Q9GZW8 240 aaPredicted RBP9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 SIRPDQ9H106 197 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 ELL3Q9HB65 397 aaPredicted RBP9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 NLKQ9UBE8 527 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 ZNF222Q9UK12 451 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 EXOGQ9Y2C4 368 aaKnown RBP9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 MYRFQ9Y2G1 1151 aa9.62□□□□□ -0.87
RABGGTA-216ENST00000560243 ANKRD61A6NGH8 418 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 DNAJC9-AS1A6NH13 148 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 DHRS7CA6NNS2 312 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 TRIM77I1YAP6 450 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 J3QT63 122 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 SLC16A6O15403 523 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 NDUFB3O43676 98 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 TOX4O94842 621 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 LIPFP07098 398 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 PSG2P11465 335 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 GABRA2P47869 451 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 DLX1P56177 255 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 UBA52P62987 128 aaKnown RBP9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 ACTC1P68032 377 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 ACTA1P68133 377 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 PRB3Q04118 309 aaPredicted RBP9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 UBE2V2Q15819 145 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 SMN1Q16637 294 aaKnown RBP9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 LRRC36Q1X8D7 754 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 LPCAT4Q643R3 524 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 C9orf139Q6ZV77 190 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 FAM220AQ7Z4H9 259 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 LHFPL3Q86UP9 236 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 CALHM1Q8IU99 346 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 ACBD7Q8N6N7 88 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 PNLDC1Q8NA58 520 aaKnown RBP9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 LY6G5BQ8NDX9 201 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 OR10AC1Q8NH08 325 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 ZNF671Q8TAW3 534 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 FAM216AQ8WUB2 273 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 ZFAND2BQ8WV99 257 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 APH1BQ8WW43 257 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 STMN2Q93045 179 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 TMIGD2Q96BF3 282 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 PELI1Q96FA3 418 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 JMJD8Q96S16 334 aa9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 ISG20L2Q9H9L3 353 aaKnown RBP9.61□□□□□ -0.87
RABGGTA-216ENST00000560243 FRRS1LQ9P0K9 344 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms