RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	C10orf35	Q96D05	121 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	POM121	Q96HA1	1249 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	METTL17	Q9H7H0	456 aa	Predicted RBP	11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ZNF696	Q9H7X3	374 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	OOEP	A6NGQ2	149 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849		A6NIN4	97 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849		F5H0A9	414 aa	Predicted RBP	11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	C3orf80	F5H4A9	247 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	SERPINA3	P01011	423 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	RPS2	P15880	293 aa	Known RBP	11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ALKBH1	Q13686	389 aa	Known RBP	11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ESCO2	Q56NI9	601 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	DMRTC1	Q5HYR2	192 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	NLRC3	Q7RTR2	1065 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	OR10Z1	Q8NGY1	313 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	FBLIM1	Q8WUP2	373 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	RPL3L	Q92901	407 aa	Known RBP	11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	TMEM80	Q96HE8	168 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	FGF23	Q9GZV9	251 aa	Predicted RBP	11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	DIMT1	Q9UNQ2	313 aa	Known RBP	11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	PPIAL4C	A0A0B4J2A2	164 aa		11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849	LOC107986453	A0A1B0GWG9	222 aa		11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849		H3BSH0	61 aa		11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849	GBX2	P52951	348 aa	Predicted RBP	11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849	LCN2	P80188	198 aa		11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849	HOXA4	Q00056	320 aa	Predicted RBP	11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849	TMPRSS11A	Q6ZMR5	421 aa		11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849	GGH	Q92820	318 aa		11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849	NEIL1	Q96FI4	390 aa	Predicted RBP	11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849	FAHD2A	Q96GK7	314 aa		11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849	OR51I2	Q9H344	312 aa		11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849	PLCXD1	Q9NUJ7	323 aa		11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CAB39	Q9Y376	341 aa	Predicted RBP	11.43	□□□□□ -0.58
CHRNB4-204	ENST00000559849		A0A0G2JMP0	313 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849		A0A0X1KG70	313 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	EFCAB10	A6NFE3	127 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ANKRD61	A6NGH8	418 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	OR4C45	A6NMZ5	311 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	SRRM5	B3KS81	715 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	PIP	P12273	146 aa	Predicted RBP	11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	MUC1	P15941	1255 aa	Predicted RBP	11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	MYL12A	P19105	171 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	GATA3	P23771	443 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ZFP36	P26651	326 aa	Known RBP	11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CD80	P33681	288 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ETV1	P50549	477 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	SEC61A1	P61619	476 aa	Known RBP	11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ST3GAL4	Q11206	333 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	MICB	Q29980	383 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	TEX36	Q5VZQ5	186 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	LAIR2	Q6ISS4	152 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ZNF676	Q8N7Q3	588 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	OR4M2	Q8NGB6	313 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	OR8B3	Q8NGG8	313 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	OR8B2	Q96RD0	313 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	GPR173	Q9NS66	373 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CNOT2	Q9NZN8	540 aa	Known RBP	11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	HHLA2	Q9UM44	414 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849		A8MXK9	166 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	SMIM18	P0DKX4	95 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	TGM4	P49221	684 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	DCAF12L2	Q5VW00	463 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	LYPD2	Q6UXB3	125 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	FAM90A1	Q86YD7	464 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ZNF573	Q86YE8	665 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	BPIFB6	Q8NFQ5	453 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ZNF671	Q8TAW3	534 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	PP6455	Q8WZ26	134 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	TECTB	Q96PL2	329 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	SLC7A11	Q9UPY5	501 aa		11.42	□□□□□ -0.58
CHRNB4-204	ENST00000559849	TMEM212	A6NML5	194 aa		11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849		E9PI62	339 aa		11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	TNFRSF13B	O14836	293 aa	Predicted RBP	11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	PHF1	O43189	567 aa	Predicted RBP	11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	XPNPEP2	O43895	674 aa		11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	GATB	O75879	557 aa	Known RBP	11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CCDC159	P0C7I6	412 aa		11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	EGR1	P18146	543 aa		11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	RPL5	P46777	297 aa	Known RBP	11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	GNB2	P62879	340 aa		11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CCDC58	Q4VC31	144 aa		11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	C12orf43	Q96C57	262 aa	Known RBP	11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CHST5	Q9GZS9	411 aa		11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CLN8	Q9UBY8	286 aa		11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	PSORS1C1	Q9UIG5	152 aa		11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ATR	Q13535	2644 aa		11.41	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CUBN	O60494	3623 aa		11.4	□□□□□ -0.58
CHRNB4-204	ENST00000559849	TRBV2	A0A0J9YWF9	115 aa		11.4	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	11.4	□□□□□ -0.58
CHRNB4-204	ENST00000559849		J3QLI3	93 aa		11.4	□□□□□ -0.58
CHRNB4-204	ENST00000559849	AKR7A2	O43488	359 aa		11.4	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ZFPL1	O95159	310 aa		11.4	□□□□□ -0.58
CHRNB4-204	ENST00000559849	FAM157C	P0CG43	387 aa		11.4	□□□□□ -0.58
CHRNB4-204	ENST00000559849	HAAO	P46952	286 aa		11.4	□□□□□ -0.58
CHRNB4-204	ENST00000559849	PITPNB	P48739	271 aa		11.4	□□□□□ -0.58
CHRNB4-204	ENST00000559849	UBE2V2	Q15819	145 aa		11.4	□□□□□ -0.58

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