RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 ACTR6Q9GZN1 396 aa10.92□□□□□ -0.66
USP3-213ENST00000559711 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.92□□□□□ -0.66
USP3-213ENST00000559711 IL36GQ9NZH8 169 aa10.92□□□□□ -0.66
USP3-213ENST00000559711 CRIM1Q9NZV1 1036 aa10.92□□□□□ -0.66
USP3-213ENST00000559711 GPR160Q9UJ42 338 aa10.92□□□□□ -0.66
USP3-213ENST00000559711 KCNK7Q9Y2U2 307 aa10.92□□□□□ -0.66
USP3-213ENST00000559711 MEIS3P1A6NDR6 274 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 HMX3A6NHT5 357 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 SPRY1O43609 319 aaPredicted RBP10.91□□□□□ -0.66
USP3-213ENST00000559711 AKAIN1P0CW23 69 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 ZNF35P13682 527 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 GTF2F2P13984 249 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 SERPINA2P20848 420 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 ID4P47928 161 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 UCP2P55851 309 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 CD300CQ08708 224 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 SFRP4Q6FHJ7 346 aaPredicted RBP10.91□□□□□ -0.66
USP3-213ENST00000559711 FJX1Q86VR8 437 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 ZDHHC23Q8IYP9 409 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 OR5A2Q8NGI9 324 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 HPSE2Q8WWQ2 592 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 HPS1Q92902 700 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 Q96M66 194 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 FGF23Q9GZV9 251 aaPredicted RBP10.91□□□□□ -0.66
USP3-213ENST00000559711 ELL3Q9HB65 397 aaPredicted RBP10.91□□□□□ -0.66
USP3-213ENST00000559711 NUDT15Q9NV35 164 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 ASF1BQ9NVP2 202 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 AMDHD2Q9Y303 409 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 MPC1Q9Y5U8 109 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 SLC25A15Q9Y619 301 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 ALG5Q9Y673 324 aa10.91□□□□□ -0.66
USP3-213ENST00000559711 SVILO95425 2214 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 IGKV1-12A0A0C4DH73 117 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 BOLA2-SMG1P6H3BVE0 249 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 MFNGO00587 321 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 MSTNO14793 375 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 ANGPTL7O43827 346 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 AGFG2O95081 481 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 DHFRP00374 187 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 IGKV1D-12P01611 117 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 CD74P04233 296 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 CD3DP04234 171 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 CPT2P23786 658 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 IL32P24001 234 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 RCVRNP35243 200 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 OPRM1P35372 400 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 TAS2R19P59542 299 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 PPP1CBP62140 327 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 RSU1Q15404 277 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 PNLIPRP3Q17RR3 467 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 STEAP1BQ6NZ63 245 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 AKAP14Q86UN6 197 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 Q8NFD4 153 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 OR4C16Q8NGL9 310 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 OR56B4Q8NH76 319 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 MRPS24Q96EL2 167 aaKnown RBP10.9□□□□□ -0.66
USP3-213ENST00000559711 MOV10Q9HCE1 1003 aaKnown RBP10.9□□□□□ -0.66
USP3-213ENST00000559711 GTF3C1Q12789 2109 aa10.9□□□□□ -0.66
USP3-213ENST00000559711 TLN1Q9Y490 2541 aaKnown RBP10.89□□□□□ -0.67
USP3-213ENST00000559711 TRAV6A0A075B6T7 132 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 ANKRD30BLA7E2S9 258 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 AKR7A2O43488 359 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 SSX5O60225 188 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 CYB5AP00167 134 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 H2AFB2P0C5Z0 115 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 RAC2P15153 192 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 TUBG1P23258 451 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 ARL6IP1Q15041 203 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 TIMM23BQ5SRD1 257 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 C1QTNF12Q5T7M4 302 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 OR2T2Q6IF00 324 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 TRAPPC6BQ86SZ2 158 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 CALHM1Q8IU99 346 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 OR4D10Q8NGI6 311 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 OR51F2Q8NH61 342 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 NUDCD2Q8WVJ2 157 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 OR5P3Q8WZ94 311 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 POM121Q96HA1 1249 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 ARHGAP5-AS1Q96IT6 56 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 C1QTNF6Q9BXI9 259 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 OR2J1Q9GZK6 312 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 OR51B6Q9H340 312 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 PIGMQ9H3S5 423 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 TUBG2Q9NRH3 451 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 PCDHB16Q9NRJ7 776 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 MCUBQ9NWR8 336 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 ETAA1Q9NY74 926 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 ZNF629Q9UEG4 869 aaPredicted RBP10.89□□□□□ -0.67
USP3-213ENST00000559711 ANAPC10Q9UM13 185 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 NCOR2Q9Y618 2525 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 C7orf66A4D0T2 115 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 A8MXE2 369 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 C1QTNF9BB2RNN3 333 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 LILRA1O75019 489 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 CA11O75493 328 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 NDUFB6O95139 128 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 HTR3BO95264 441 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 CSTBP04080 98 aaKnown RBP10.89□□□□□ -0.67
USP3-213ENST00000559711 CECR9P0C854 216 aa10.89□□□□□ -0.67
USP3-213ENST00000559711 C1QTNF9P0C862 333 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms