RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 RIIAD1A6NNX1 92 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 VGLL3A8MV65 326 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 ZNF732B4DXR9 585 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 ARPC2O15144 300 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 SOX14O95416 240 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 HSD17B1P14061 328 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 ZNF3P17036 446 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 PAICSP22234 425 aaKnown RBP13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 GSTT1P30711 240 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 RAB13P51153 203 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 RPL31P62899 125 aaKnown RBP13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 GNGT1P63211 74 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 CNN3Q15417 329 aaKnown RBP13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 SAMD4BQ5PRF9 694 aaKnown RBP13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 TMEM200BQ69YZ2 307 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 CCBE1Q6UXH8 406 aaPredicted RBP13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 THAP5Q7Z6K1 395 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 DYNAPQ8N1N2 210 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 ZNF671Q8TAW3 534 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 OR5M11Q96RB7 305 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 CDCA4Q9BXL8 241 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 OR51I2Q9H344 312 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 ARMC1Q9NVT9 282 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 TCF19Q9Y242 345 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 LRP12Q9Y561 859 aa13.13□□□□□ -0.31
CDC42BPB-205ENST00000559245 hCG_1809904A0A1W2PP81 198 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 A0A1W2PPE2 198 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 A0A1W2PR64 198 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 A0A1W2PRV1 198 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 FAM90A8PA6NJQ4 464 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 FAM183AA6NL82 134 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 PEX14O75381 377 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 CCNB2O95067 398 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 IGLL1P15814 213 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 CD33P20138 364 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 ERVFRD-1P60508 538 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 GNG3P63215 75 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 PPP1R8Q12972 351 aaKnown RBP13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 CEP78Q5JTW2 689 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 TMEM219Q86XT9 240 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 CD177Q8N6Q3 437 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 AQP11Q8NBQ7 271 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 OR8B12Q8NGG6 310 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 OTULINQ96BN8 352 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 PRSS22Q9GZN4 317 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 WNT10AQ9GZT5 417 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 CMC2Q9NRP2 79 aa13.12□□□□□ -0.31
CDC42BPB-205ENST00000559245 RYR3Q15413 4870 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 A6NDX4 124 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 RFPL4AA6NLU0 287 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 RFPL4AL1F8VTS6 287 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 K7EIL1 84 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 MTRF1O75570 445 aaKnown RBP13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 LYNP07948 512 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 CCL3L1P16619 93 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 FAHP16930 419 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 PRDX6P30041 224 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 DMRTC1Q5HYR2 192 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 C11orf87Q6NUJ2 197 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 ZNF782Q6ZMW2 699 aaPredicted RBP13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 ACP7Q6ZNF0 438 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 WFDC9Q8NEX5 89 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 OR4M1Q8NGD0 313 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 OR2T27Q8NH04 317 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 FAM81AQ8TBF8 368 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 THEM6Q8WUY1 208 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 AQP3Q92482 292 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 MYLK2Q9H1R3 596 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 ABCB10Q9NRK6 738 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 RASL12Q9NYN1 266 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 USE1Q9NZ43 259 aa13.11□□□□□ -0.31
CDC42BPB-205ENST00000559245 DNAH9Q9NYC9 4486 aa13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 SLC1A7O00341 560 aa13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 FAM107AO95990 144 aa13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 MAP2K3P46734 347 aa13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 PSMA6P60900 246 aaKnown RBP13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 ZNF273Q14593 569 aa13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 CEACAM21Q3KPI0 293 aa13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 ARSJQ5FYB0 599 aaPredicted RBP13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 HAGHLQ6PII5 290 aaPredicted RBP13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 Q6ZS46 218 aa13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 KRT74Q7RTS7 529 aa13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 ZNF561Q8N587 486 aa13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 OTOSQ8NHW6 89 aa13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 RPS4Y2Q8TD47 263 aa13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 OR51V1Q9H2C8 321 aa13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 PITPNC1Q9UKF7 332 aa13.1□□□□□ -0.31
CDC42BPB-205ENST00000559245 A0A1W2PRX2 142 aa13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 OR5B21A6NL26 309 aa13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 SELENOFO60613 162 aa13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 VSIG8P0DPA2 414 aa13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 PRDX2P32119 198 aa13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 CEBPDP49716 269 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 SMIM21Q3B7S5 101 aa13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 PIGWQ7Z7B1 504 aa13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 OR5A2Q8NGI9 324 aa13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 FOXRED1Q96CU9 486 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 MALSU1Q96EH3 234 aa13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 ZNF488Q96MN9 340 aa13.09□□□□□ -0.31
CDC42BPB-205ENST00000559245 CDRT15Q96T59 188 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms