RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ASCL4Q6XD76 172 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 DPPA2Q7Z7J5 298 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 TUSC5Q8IXB3 177 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 ZFP62Q8NB50 900 aaPredicted RBP9.82□□□□□ -0.84
CLPX-204ENST00000559152 SPSB4Q96A44 273 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 APH1AQ96BI3 265 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 SLC7A10Q9NS82 523 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 FAM86C1Q9NVL1 165 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 PLEKHJ1Q9NW61 149 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 HSF4Q9ULV5 492 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 EDARQ9UNE0 448 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 LOC100509620A0A075B734 347 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 FXYD6-FXYD2A0A087WZ82 144 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 ZNF816-ZNF321PA0A0X1KG74 233 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 FAM230AA0A1W2PPH8 454 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 OR2AT4A6NND4 320 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 ARPC5O15511 151 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 RAD51DO75771 328 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 PATE4P0C8F1 98 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 RPA2P15927 270 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 ARR3P36575 388 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 SNU13P55769 128 aaKnown RBP9.82□□□□□ -0.84
CLPX-204ENST00000559152 FAM3AP98173 230 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 HGFACQ04756 655 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 PPP1R1AQ13522 171 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 EXOSC2Q13868 293 aaKnown RBP9.82□□□□□ -0.84
CLPX-204ENST00000559152 TMEM128Q5BJH2 165 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 DCAF12L2Q5VW00 463 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 NSUN5P2Q63ZY6 315 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 C3P1Q6ZMU1 363 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 PIP4P1Q86T03 277 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 TMEM178AQ8NBL3 297 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 TMEM185AQ8NFB2 350 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 PXT1Q8NFP0 134 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 MRGPRFQ96AM1 343 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 Q96M66 194 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 PDCD10Q9BUL8 212 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 FXYD6Q9H0Q3 95 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 IRF2BPLQ9H1B7 796 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 CALHM2Q9HA72 323 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 MED12Q93074 2177 aa9.82□□□□□ -0.84
CLPX-204ENST00000559152 EFSO43281 561 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 RP2O75695 350 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 SERPINA5P05154 406 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 FPR2P25090 351 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 SURF2Q15527 256 aaPredicted RBP9.81□□□□□ -0.84
CLPX-204ENST00000559152 CHRFAM7AQ494W8 412 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 LY6G6FQ5SQ64 297 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 TMEM65Q6PI78 240 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 COLCA1Q6ZS62 124 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 TMUB2Q71RG4 321 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 DTX1Q86Y01 620 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 CSNK2A3Q8NEV1 391 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 OR5AP2Q8NGF4 316 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 OR10K1Q8NGX5 313 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 ST6GALNAC5Q9BVH7 336 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 GSX2Q9BZM3 304 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 GP6Q9HCN6 339 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 IL36GQ9NZH8 169 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 GPR132Q9UNW8 380 aa9.81□□□□□ -0.84
CLPX-204ENST00000559152 OR5H14A6NHG9 310 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 HTR3BO95264 441 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 PPP3CBP16298 524 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 AKR1C4P17516 323 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 ARG2P78540 354 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 SORDQ00796 357 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 ZNF92Q03936 586 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 ESCO2Q56NI9 601 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 C17orf107Q6ZR85 190 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 SUMF1Q8NBK3 374 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 FGFBP3Q8TAT2 258 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 FNDC9Q8TBE3 224 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 MARCH1Q8TCQ1 289 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 A0A0B4J2A0 478 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 A0A0D9SG52 128 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 PRR33A8MZF0 331 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 LRP3O75074 770 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 IGHV3-9P01782 118 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 SLC25A4P12235 298 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 VAMP1P23763 118 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 GABRR1P24046 479 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 CYCSP99999 105 aaKnown RBP9.8□□□□□ -0.84
CLPX-204ENST00000559152 MALLQ13021 153 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 RFPL4BQ6ZWI9 263 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 ZSCAN4Q8NAM6 433 aaPredicted RBP9.8□□□□□ -0.84
CLPX-204ENST00000559152 MFFQ9GZY8 342 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 PPA2Q9H2U2 334 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 OPA3Q9H6K4 179 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 LDAHQ9H6V9 325 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 SHPKQ9UHJ6 478 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 NCKAP5O14513 1909 aa9.8□□□□□ -0.84
CLPX-204ENST00000559152 NCOA6Q14686 2063 aaPredicted RBP9.8□□□□□ -0.84
CLPX-204ENST00000559152 RIF1Q5UIP0 2472 aaKnown RBP9.79□□□□□ -0.84
CLPX-204ENST00000559152 ARGFXA6NJG6 315 aa9.79□□□□□ -0.84
CLPX-204ENST00000559152 RRP8O43159 456 aaKnown RBP9.79□□□□□ -0.84
CLPX-204ENST00000559152 PLP2Q04941 152 aa9.79□□□□□ -0.84
CLPX-204ENST00000559152 HLXQ14774 488 aaPredicted RBP9.79□□□□□ -0.84
CLPX-204ENST00000559152 ZNF766Q5HY98 468 aa9.79□□□□□ -0.84
CLPX-204ENST00000559152 DMRTC1Q5HYR2 192 aa9.79□□□□□ -0.84
CLPX-204ENST00000559152 PLCXD3Q63HM9 321 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms