RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MYOZ1Q9NP98 299 aaPredicted RBP9.14□□□□□ -0.95
TPM1-217ENST00000559108 DHDHQ9UQ10 334 aa9.14□□□□□ -0.95
TPM1-217ENST00000559108 MALRD1Q5VYJ5 2156 aa9.14□□□□□ -0.95
TPM1-217ENST00000559108 IGKV1-12A0A0C4DH73 117 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 A0A1B0GW55 424 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 FAM230AA0A1W2PPH8 454 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 SHISA3A0PJX4 238 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 OR5B21A6NL26 309 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 A6NLC8 198 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 ANXA2P2A6NMY6 339 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 TNFRSF13BO14836 293 aaPredicted RBP9.13□□□□□ -0.95
TPM1-217ENST00000559108 SMAD7O15105 426 aaKnown RBP9.13□□□□□ -0.95
TPM1-217ENST00000559108 IGKV1D-12P01611 117 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 CD1AP06126 327 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 CSF3P09919 207 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 OCM2P0CE71 109 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 DUX4L2P0CJ85 424 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 DUX4L3P0CJ86 424 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 DUX4L4P0CJ87 422 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 DUX4L5P0CJ88 424 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 DUX4L6P0CJ89 424 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 DUX4L7P0CJ90 424 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 ZNF20P17024 532 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 ADRA2CP18825 462 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 TNFRSF1AP19438 455 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 AZGP1P25311 298 aaKnown RBP9.13□□□□□ -0.95
TPM1-217ENST00000559108 TGFBR2P37173 567 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 GPR6P46095 362 aaPredicted RBP9.13□□□□□ -0.95
TPM1-217ENST00000559108 TAS2R43P59537 309 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 LMO4P61968 165 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 FABP5Q01469 135 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 ZNF181Q2M3W8 571 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 YIF1BQ5BJH7 314 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 HAGHLQ6PII5 290 aaPredicted RBP9.13□□□□□ -0.95
TPM1-217ENST00000559108 DUX4L9Q6RFH8 374 aaPredicted RBP9.13□□□□□ -0.95
TPM1-217ENST00000559108 LYPD2Q6UXB3 125 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 UNQ9370/PRO34162Q6UXP9 181 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 KCTD8Q6ZWB6 473 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 LYPD6Q86Y78 171 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 FGFRL1Q8N441 504 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 BOLLQ8N9W6 283 aaKnown RBP9.13□□□□□ -0.95
TPM1-217ENST00000559108 SPERTQ8NA61 448 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 OR52N4Q8NGI2 321 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 OR5A2Q8NGI9 324 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 CLDND2Q8NHS1 167 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 HAVCR2Q8TDQ0 301 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 LRRC29Q8WV35 223 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 PP6455Q8WZ26 134 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 CYYR1Q96J86 154 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 MICU1Q9BPX6 476 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 PIMREGQ9BSJ6 248 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 ZCCHC4Q9H5U6 513 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 TMEM165Q9HC07 324 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 IL36RNQ9UBH0 155 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 DUX4Q9UBX2 424 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 NPTNQ9Y639 398 aa9.13□□□□□ -0.95
TPM1-217ENST00000559108 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.12□□□□□ -0.95
TPM1-217ENST00000559108 TMEM210A6NLX4 147 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 ZNF879B4DU55 563 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 FAM157AC9JC47 383 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 CLDN25C9JDP6 229 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 NDUFS8O00217 210 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 AKR7A2O43488 359 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 SULT1B1O43704 296 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 MRPS14O60783 128 aaKnown RBP9.12□□□□□ -0.95
TPM1-217ENST00000559108 PLATP00750 562 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 RPSAP08865 295 aaKnown RBP9.12□□□□□ -0.95
TPM1-217ENST00000559108 MPZP25189 248 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 TMEM33P57088 247 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 DSCR9P59020 149 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 ZP1P60852 638 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 GMFBP60983 142 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 BTG1P62324 171 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 GNG3P63215 75 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 NEDD8Q15843 81 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 Q499Y3 187 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 ARMCX4Q5H9R4 360 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 SFRP4Q6FHJ7 346 aaPredicted RBP9.12□□□□□ -0.95
TPM1-217ENST00000559108 FAM90A1Q86YD7 464 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 FTMTQ8N4E7 242 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 CCDC54Q8NEL0 328 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 DEFB108BQ8NET1 73 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 OR5D18Q8NGL1 313 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 UFD1Q92890 307 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 ITFG2Q969R8 447 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 MUL1Q969V5 352 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 C10orf35Q96D05 121 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 MYCBPQ99417 103 aaPredicted RBP9.12□□□□□ -0.95
TPM1-217ENST00000559108 GFI1Q99684 422 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 FN3KRPQ9HA64 309 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 ISYNA1Q9NPH2 558 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 NOX4Q9NPH5 578 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 C14orf119Q9NWQ9 140 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 MTCH1Q9NZJ7 389 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 CTSZQ9UBR2 303 aa9.12□□□□□ -0.95
TPM1-217ENST00000559108 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.11□□□□□ -0.95
TPM1-217ENST00000559108 TEP1Q99973 2627 aaKnown RBP9.11□□□□□ -0.95
TPM1-217ENST00000559108 hCG_1807616A0A1W2PRN6 198 aa9.11□□□□□ -0.95
TPM1-217ENST00000559108 SRRM5B3KS81 715 aa9.11□□□□□ -0.95
TPM1-217ENST00000559108 F5H0A9 414 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms